Strain Fitness in Pseudomonas simiae WCS417 around PS417_26570

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,744,938	+				-1.6
5,744,939	-				-0.3
5,744,945	+				+0.4
5,745,480	-		PS417_26565	0.57	+0.2
5,745,587	+		PS417_26565	0.69	+0.1
5,745,587	+		PS417_26565	0.69	-1.1
5,745,587	+		PS417_26565	0.69	+0.6
5,745,767	+		PS417_26565	0.89	+1.6
5,745,802	+				-0.0
5,745,850	-				+0.2
5,745,864	-				-0.2
5,745,918	+				+1.2
5,745,918	+				+0.1
5,745,918	+				+2.6
5,745,919	-				-0.4
5,745,919	-				-1.0
5,745,919	-				-2.0
5,745,919	-				-2.9
5,745,976	+		PS417_26570	0.11	+0.4
5,746,018	+		PS417_26570	0.18	+0.4
5,746,032	+		PS417_26570	0.20	-1.1
5,746,032	+		PS417_26570	0.20	+2.0
5,746,032	+		PS417_26570	0.20	+0.3
5,746,032	+		PS417_26570	0.20	+0.5
5,746,033	-		PS417_26570	0.20	-2.3
5,746,061	-		PS417_26570	0.25	+0.4
5,746,270	-		PS417_26570	0.59	-0.6
5,746,291	-		PS417_26570	0.62	-2.1
5,746,291	-		PS417_26570	0.62	+2.2
5,746,351	-		PS417_26570	0.72	-1.3
5,746,368	+		PS417_26570	0.74	+0.4
5,746,384	+		PS417_26570	0.77	+0.3
5,746,385	-		PS417_26570	0.77	-2.3
5,746,385	-		PS417_26570	0.77	+1.1
5,746,393	-		PS417_26570	0.78	+0.2
5,746,393	-		PS417_26570	0.78	-0.3
5,746,393	-		PS417_26570	0.78	+0.0
5,746,521	+				-0.2
5,746,521	+				-0.1
5,746,521	+				+0.6
5,746,522	-				-1.6
5,746,602	-				+0.5
5,746,876	+		PS417_26575	0.22	+0.3
5,746,876	+		PS417_26575	0.22	-2.3
5,746,876	+		PS417_26575	0.22	+1.3
5,746,877	-		PS417_26575	0.22	+1.7
5,746,925	-				+0.7
5,746,984	-		PS417_26575	0.34	-0.4
5,747,089	-		PS417_26575	0.45	+0.1
5,747,089	-		PS417_26575	0.45	+1.3
5,747,089	-		PS417_26575	0.45	-1.8
5,747,186	+		PS417_26575	0.56	-1.3
5,747,186	+		PS417_26575	0.56	-1.1
5,747,186	+		PS417_26575	0.56	-0.1
5,747,187	-		PS417_26575	0.56	+0.2
5,747,187	-		PS417_26575	0.56	-0.2
5,747,434	+		PS417_26575	0.83	+0.3
5,747,434	+		PS417_26575	0.83	-1.3
5,747,435	-		PS417_26575	0.83	-0.1
5,747,435	-		PS417_26575	0.83	+2.6
5,747,436	+		PS417_26575	0.83	-0.8
5,747,437	-		PS417_26575	0.83	+0.3
5,747,437	-		PS417_26575	0.83	-0.2
5,747,493	-		PS417_26575	0.89	-0.9
5,747,493	-		PS417_26575	0.89	+1.7