Strain Fitness in Pseudomonas simiae WCS417 around PS417_26325

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,688,120	+				+1.9
5,688,120	+				+0.5
5,688,120	+				-0.8
5,688,121	-				+3.3
5,688,121	-				-0.9
5,688,121	-				-0.5
5,688,121	-				+1.0
5,688,167	+				+1.7
5,688,234	+				-1.4
5,688,234	+				-2.4
5,688,235	-				+0.6
5,688,235	-				-0.7
5,688,264	-				+0.9
5,688,271	+				-0.4
5,688,271	+				+0.0
5,688,272	-				+0.1
5,688,272	-				+0.0
5,688,272	-				-0.3
5,688,316	+				-0.4
5,688,316	+				+0.4
5,688,317	-				+0.1
5,688,317	-				-0.2
5,688,439	-		PS417_26320	0.24	-3.1
5,688,439	-		PS417_26320	0.24	-0.3
5,688,439	-		PS417_26320	0.24	+1.4
5,688,604	+		PS417_26320	0.43	-0.9
5,688,604	+		PS417_26320	0.43	-0.5
5,688,605	-		PS417_26320	0.43	-0.1
5,688,715	-		PS417_26320	0.56	+0.8
5,688,755	-		PS417_26320	0.61	+0.5
5,689,063	-				-1.1
5,689,063	-				+4.8
5,689,068	-				+0.0
5,689,068	-				-0.3
5,689,824	+		PS417_26325	0.63	-0.6
5,689,825	-		PS417_26325	0.63	-0.7
5,689,866	+		PS417_26325	0.67	+0.0
5,689,866	+		PS417_26325	0.67	+0.7
5,689,866	+		PS417_26325	0.67	+0.1
5,689,866	+		PS417_26325	0.67	+0.1
5,689,866	+		PS417_26325	0.67	-0.3
5,689,866	+		PS417_26325	0.67	-0.3
5,689,866	+		PS417_26325	0.67	-0.9
5,689,866	+		PS417_26325	0.67	+0.6
5,689,867	-		PS417_26325	0.67	-0.6
5,689,875	-		PS417_26325	0.67	-1.4
5,689,889	+		PS417_26325	0.69	-1.2
5,690,227	-				-0.5
5,690,227	-				+1.9
5,690,280	+				-1.4
5,690,280	+				+0.3
5,690,280	+				-0.9
5,690,281	-				-0.7
5,690,326	+				-0.4
5,690,326	+				-1.7
5,690,327	-				-0.3
5,690,386	+				-0.1
5,690,386	+				-1.1
5,690,387	-				-1.7
5,690,445	+				+0.2
5,690,446	-				+0.5
5,690,452	+				+0.3
5,690,453	-				-2.0
5,690,454	+				-2.4
5,690,454	+				-2.2
5,690,454	+				-0.1
5,690,454	+				-0.3
5,690,454	+				-0.3
5,690,455	-				+0.5
5,690,455	-				+0.2
5,690,566	-				+1.0
5,690,580	+				+0.0
5,690,581	-				-0.8
5,690,935	+		PS417_26330	0.24	-0.2
5,690,936	-		PS417_26330	0.25	+1.0
5,691,222	+		PS417_26330	0.39	-0.7
5,691,222	+		PS417_26330	0.39	+0.9
5,691,223	-		PS417_26330	0.39	-0.6
5,691,223	-		PS417_26330	0.39	-1.2