Strain Fitness in Pseudomonas simiae WCS417 around PS417_26205

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,661,990	-				+0.3
5,662,113	+				+0.6
5,662,114	-				+0.6
5,662,224	-				-1.9
5,662,344	+		PS417_26200	0.25	+0.3
5,662,345	-		PS417_26200	0.25	+1.2
5,662,349	+		PS417_26200	0.25	+0.5
5,662,404	-		PS417_26200	0.33	-1.0
5,662,447	+		PS417_26200	0.39	+0.1
5,662,447	+		PS417_26200	0.39	+0.6
5,662,447	+		PS417_26200	0.39	+2.6
5,662,448	-		PS417_26200	0.39	-1.1
5,662,448	-		PS417_26200	0.39	+0.3
5,662,448	-		PS417_26200	0.39	+0.4
5,662,517	-		PS417_26200	0.48	+0.4
5,662,612	-		PS417_26200	0.61	-0.0
5,662,667	+		PS417_26200	0.69	-0.9
5,662,763	+		PS417_26200	0.82	+0.8
5,662,763	+		PS417_26200	0.82	-1.1
5,662,763	+		PS417_26200	0.82	-0.9
5,662,764	-		PS417_26200	0.82	-0.6
5,662,791	-		PS417_26200	0.86	+1.1
5,662,894	-				-0.2
5,662,948	+				+0.1
5,663,020	+				+0.3
5,663,021	-				+0.2
5,663,021	-				+0.7
5,663,219	-		PS417_26205	0.23	-1.6
5,663,438	-		PS417_26205	0.44	-0.5
5,663,438	-		PS417_26205	0.44	-1.3
5,663,438	-		PS417_26205	0.44	-0.6
5,663,646	+		PS417_26205	0.64	-0.6
5,663,646	+		PS417_26205	0.64	-0.4
5,663,647	-		PS417_26205	0.64	-0.7
5,663,918	-		PS417_26205	0.90	-1.6
5,663,982	-				+1.0
5,664,080	-				-1.0
5,664,080	-				+0.2
5,664,083	+				+0.9
5,664,216	+				-0.8
5,664,372	+		PS417_26210	0.86	+0.3
5,664,484	+				+0.3
5,664,644	+				-0.8
5,664,645	-				+1.5
5,664,647	-				-0.7