Strain Fitness in Pseudomonas simiae WCS417 around PS417_25365

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,490,873	+				+1.0
5,490,874	-				-0.3
5,490,874	-				-1.9
5,490,874	-				+0.1
5,490,924	-				+0.3
5,490,961	+				+2.8
5,490,961	+				-0.1
5,490,961	+				-1.6
5,490,961	+				+5.4
5,490,966	+				+0.1
5,490,966	+				+0.8
5,490,967	-				-2.8
5,491,044	+				+0.8
5,491,044	+				+0.1
5,491,396	-		PS417_25360	0.70	-1.4
5,491,396	-		PS417_25360	0.70	-1.2
5,491,396	-		PS417_25360	0.70	-0.2
5,491,485	+		PS417_25360	0.86	-0.6
5,491,485	+		PS417_25360	0.86	+1.2
5,491,485	+		PS417_25360	0.86	-0.0
5,491,485	+		PS417_25360	0.86	+1.0
5,491,486	-		PS417_25360	0.86	-0.1
5,491,486	-		PS417_25360	0.86	+0.7
5,491,486	-		PS417_25360	0.86	+0.1
5,491,486	-		PS417_25360	0.86	+0.1
5,491,486	-		PS417_25360	0.86	+0.2
5,491,537	-				+1.7
5,491,793	-		PS417_25365	0.27	+0.1
5,491,844	-		PS417_25365	0.34	+0.6
5,491,844	-		PS417_25365	0.34	-3.4
5,491,846	+		PS417_25365	0.34	+0.2
5,491,849	+		PS417_25365	0.34	-0.4
5,491,850	-		PS417_25365	0.35	+0.7
5,491,850	-		PS417_25365	0.35	+0.7
5,492,097	+		PS417_25365	0.67	+0.1
5,492,097	+		PS417_25365	0.67	+1.7
5,492,097	+		PS417_25365	0.67	-0.3
5,492,098	-		PS417_25365	0.67	+0.6
5,492,098	-		PS417_25365	0.67	-2.1
5,492,098	-		PS417_25365	0.67	+0.9
5,492,098	-		PS417_25365	0.67	+0.1
5,492,326	+				+0.3
5,492,326	+				+0.4
5,492,326	+				+0.1
5,492,327	-				-0.4
5,492,327	-				-3.5
5,492,327	-				-0.3
5,492,327	-				+1.2
5,492,471	-				+1.1
5,492,472	+				+0.1
5,492,472	+				+0.4
5,492,497	+				+0.1
5,492,497	+				+0.1
5,492,497	+				-1.1
5,492,497	+				-0.2
5,492,498	-				-0.2
5,492,498	-				-0.2
5,492,498	-				-1.4
5,492,528	+				-0.4
5,492,528	+				+0.9
5,492,528	+				+1.4
5,492,529	-				-1.0
5,492,529	-				+0.0
5,492,529	-				-0.6
5,492,529	-				+0.4
5,492,529	-				-1.6
5,492,529	-				+0.3
5,492,529	-				+1.5
5,492,529	-				-1.5
5,492,530	+				+0.2
5,492,531	-				-0.9
5,492,617	+				+0.4
5,492,688	+		PS417_25370	0.17	+1.3
5,492,724	-		PS417_25370	0.21	-0.2
5,492,724	-		PS417_25370	0.21	-1.6
5,492,806	-		PS417_25370	0.29	-0.2
5,492,806	-		PS417_25370	0.29	+0.0
5,492,884	+		PS417_25370	0.38	+0.5
5,492,884	+		PS417_25370	0.38	-0.2
5,492,885	-		PS417_25370	0.38	-1.3
5,492,901	+		PS417_25370	0.40	-0.6
5,492,923	-		PS417_25370	0.42	+0.1
5,492,989	+		PS417_25370	0.49	-0.3
5,492,989	+		PS417_25370	0.49	-1.0
5,492,990	-		PS417_25370	0.49	-2.0
5,492,991	+		PS417_25370	0.49	+0.7
5,492,992	-		PS417_25370	0.49	+0.5
5,492,992	-		PS417_25370	0.49	+2.4
5,493,028	+		PS417_25370	0.53	-0.1
5,493,138	+		PS417_25370	0.65	+0.3
5,493,191	+		PS417_25370	0.71	-1.4
5,493,192	-		PS417_25370	0.71	-0.8
5,493,192	-		PS417_25370	0.71	-0.2
5,493,258	-		PS417_25370	0.78	+0.4
5,493,279	-		PS417_25370	0.80	-1.0