Strain Fitness in Pseudomonas simiae WCS417 around PS417_23880

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,165,272	+				-0.7
5,165,273	-				-0.5
5,165,339	-				+1.7
5,165,350	+				-1.3
5,165,350	+				+0.3
5,165,350	+				+0.4
5,165,351	-				+0.8
5,165,351	-				+0.4
5,165,409	-				-0.4
5,165,409	-				-1.0
5,165,422	+				+1.7
5,165,422	+				-1.2
5,165,423	-				-3.1
5,165,423	-				-0.7
5,165,427	-				+0.5
5,165,427	-				-0.3
5,165,449	+				+0.6
5,165,449	+				+0.5
5,165,506	+				-1.9
5,165,580	+				-1.1
5,166,143	+				-1.1
5,166,147	+				-0.7
5,166,147	+				+0.6
5,166,147	+				-1.2
5,166,147	+				+0.4
5,166,148	-				+0.7
5,166,148	-				-0.8
5,166,330	+		PS417_23880	0.22	-0.1
5,166,331	-		PS417_23880	0.22	-1.6
5,166,384	+		PS417_23880	0.28	-0.3
5,166,385	-		PS417_23880	0.28	-0.1
5,166,462	+		PS417_23880	0.37	+1.3
5,166,462	+		PS417_23880	0.37	-2.8
5,166,462	+		PS417_23880	0.37	-1.5
5,166,462	+		PS417_23880	0.37	-0.5
5,166,474	+		PS417_23880	0.39	+1.1
5,166,604	+		PS417_23880	0.53	-0.3
5,166,605	-		PS417_23880	0.53	-0.0
5,166,639	+		PS417_23880	0.57	-1.9
5,166,739	-		PS417_23880	0.68	-0.3
5,166,871	+		PS417_23880	0.83	-1.0
5,167,085	+				-1.0
5,167,085	+				-0.3
5,167,085	+				-0.8
5,167,085	+				-1.7
5,167,086	-				-1.0
5,167,086	-				+0.0
5,167,086	-				+1.3
5,167,092	-				-0.6
5,167,125	-		PS417_23885	0.24	+0.5
5,167,188	-				-1.1
5,167,371	+				-1.7