Strain Fitness in Pseudomonas simiae WCS417 around PS417_23525

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,088,736	-				+2.1
5,088,736	-				+0.3
5,088,751	-				+0.7
5,089,003	-		PS417_23520	0.17	+0.1
5,089,081	-		PS417_23520	0.27	-0.4
5,089,192	+		PS417_23520	0.42	+0.1
5,089,192	+		PS417_23520	0.42	-0.6
5,089,192	+		PS417_23520	0.42	+1.0
5,089,192	+		PS417_23520	0.42	+0.6
5,089,193	-		PS417_23520	0.42	-0.5
5,089,193	-		PS417_23520	0.42	+1.5
5,089,639	-				-2.1
5,089,981	-		PS417_23525	0.24	+0.5
5,089,981	-		PS417_23525	0.24	-0.2
5,090,080	-		PS417_23525	0.32	+1.2
5,090,080	-		PS417_23525	0.32	-2.4
5,090,127	+		PS417_23525	0.36	+1.2
5,090,128	-		PS417_23525	0.36	-0.2
5,090,145	-		PS417_23525	0.37	+0.7
5,090,300	-		PS417_23525	0.50	-0.4
5,090,326	-		PS417_23525	0.52	-1.5
5,090,326	-		PS417_23525	0.52	-1.1
5,090,397	+		PS417_23525	0.58	-0.0
5,090,642	+		PS417_23525	0.79	+0.1
5,090,643	-		PS417_23525	0.79	+0.5
5,090,656	-		PS417_23525	0.80	+1.4
5,090,665	+		PS417_23525	0.81	-0.1
5,090,666	-		PS417_23525	0.81	+1.2
5,090,666	-		PS417_23525	0.81	+1.4
5,090,867	+				+1.1
5,090,867	+				+1.4
5,090,868	-				-0.6
5,090,971	+				-0.3
5,091,278	+		PS417_23530	0.37	-0.3
5,091,278	+		PS417_23530	0.37	-1.5
5,091,278	+		PS417_23530	0.37	+2.4
5,091,278	+		PS417_23530	0.37	-0.7
5,091,279	-		PS417_23530	0.37	-0.9
5,091,279	-		PS417_23530	0.37	-0.3
5,091,449	+		PS417_23530	0.53	+0.7
5,091,603	-		PS417_23530	0.67	+1.2
5,091,694	+		PS417_23530	0.75	-2.3
5,091,842	+		PS417_23530	0.88	+1.9