Strain Fitness in Pseudomonas simiae WCS417 around PS417_23290

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,042,941	-				-1.6
5,042,941	-				+1.1
5,042,941	-				+0.6
5,042,969	+				+1.6
5,043,059	-				-0.3
5,043,184	+				-0.2
5,043,201	+				-0.3
5,043,201	+				+1.1
5,043,230	-				+0.8
5,043,241	-				+2.2
5,043,269	+				+3.0
5,043,480	-		PS417_23290	0.23	+0.1
5,043,505	+		PS417_23290	0.31	-0.1
5,043,505	+		PS417_23290	0.31	-2.3
5,043,506	-		PS417_23290	0.31	-1.3
5,043,506	-		PS417_23290	0.31	-0.8
5,043,620	+		PS417_23290	0.66	+0.5
5,043,620	+		PS417_23290	0.66	-0.9
5,043,620	+		PS417_23290	0.66	-0.2
5,043,712	+				-1.3
5,043,713	-				+0.5
5,043,728	+				-0.9
5,043,729	-				-0.3
5,043,729	-				-2.8
5,043,731	-				+0.1
5,043,742	+				+0.5
5,043,985	+		PS417_23295	0.38	+0.1
5,043,985	+		PS417_23295	0.38	-0.4
5,043,986	-		PS417_23295	0.39	+0.1
5,043,986	-		PS417_23295	0.39	-1.4
5,043,986	-		PS417_23295	0.39	-0.0
5,043,986	-		PS417_23295	0.39	+0.8
5,043,986	-		PS417_23295	0.39	-1.0
5,044,120	+		PS417_23295	0.60	-0.9
5,044,120	+		PS417_23295	0.60	-0.4
5,044,121	-		PS417_23295	0.60	+0.9
5,044,121	-		PS417_23295	0.60	+1.0
5,044,214	+		PS417_23295	0.74	-0.5
5,044,214	+		PS417_23295	0.74	+0.2
5,044,214	+		PS417_23295	0.74	-0.4
5,044,214	+		PS417_23295	0.74	+0.3
5,044,214	+		PS417_23295	0.74	+0.4
5,044,214	+		PS417_23295	0.74	-0.5
5,044,215	-		PS417_23295	0.75	-1.2
5,044,215	-		PS417_23295	0.75	-1.1
5,044,216	+		PS417_23295	0.75	-1.5
5,044,216	+		PS417_23295	0.75	+0.1
5,044,216	+		PS417_23295	0.75	-0.9
5,044,216	+		PS417_23295	0.75	+0.3
5,044,216	+		PS417_23295	0.75	+0.6
5,044,216	+		PS417_23295	0.75	+1.0
5,044,216	+		PS417_23295	0.75	-0.8
5,044,297	+		PS417_23295	0.87	+0.1
5,044,298	-		PS417_23295	0.88	-0.9
5,044,298	-				-0.6
5,044,348	+				-1.4
5,044,349	-				+1.2
5,044,415	+				+0.5
5,044,415	+				+0.7
5,044,416	-				+0.8
5,044,416	-				-0.9
5,044,416	-				+1.1
5,044,460	+				-0.2
5,044,460	+				+0.2
5,044,461	-				+0.1
5,044,484	+				+0.2
5,044,484	+				-0.9
5,044,484	+				+0.1
5,044,485	-				-0.1
5,044,485	-				+0.7
5,044,609	+		PS417_23300	0.28	-0.2
5,044,609	+		PS417_23300	0.28	+0.1
5,044,610	-		PS417_23300	0.28	+0.8
5,044,610	-		PS417_23300	0.28	+1.5
5,044,638	+		PS417_23300	0.36	-1.5
5,044,639	-		PS417_23300	0.36	+1.3
5,044,711	+		PS417_23300	0.56	-2.2
5,044,729	+		PS417_23300	0.60	-0.2
5,044,730	-		PS417_23300	0.61	-0.3