Strain Fitness in Pseudomonas simiae WCS417 around PS417_22150

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,797,978	+		PS417_22145	0.32	+0.6
4,798,126	+		PS417_22145	0.43	-0.9
4,798,126	+		PS417_22145	0.43	-0.2
4,798,126	+		PS417_22145	0.43	+1.4
4,798,126	+		PS417_22145	0.43	-2.5
4,798,126	+		PS417_22145	0.43	-1.0
4,798,127	-		PS417_22145	0.44	-0.0
4,798,127	-		PS417_22145	0.44	-0.0
4,798,127	-		PS417_22145	0.44	-1.5
4,798,127	-		PS417_22145	0.44	-0.7
4,798,127	-		PS417_22145	0.44	+0.6
4,798,336	+		PS417_22145	0.60	+1.5
4,798,444	+				+0.1
4,798,444	+		PS417_22145	0.68	-0.2
4,798,444	+		PS417_22145	0.68	+0.8
4,798,456	+		PS417_22145	0.69	-0.8
4,798,457	-		PS417_22145	0.69	+0.8
4,798,824	-				+1.5
4,798,875	+				-1.2
4,798,875	+				-0.3
4,798,876	-				+0.5
4,798,890	+				-0.2
4,798,891	-				-0.0
4,798,891	-				-0.7
4,798,891	-				-1.5
4,798,937	+				+1.7
4,798,937	+				+1.1
4,798,975	-				-0.4
4,798,975	-				-1.6
4,799,034	-				-3.2
4,799,052	+				+0.7
4,799,052	+				-0.2
4,799,053	-				-0.6
4,799,299	-		PS417_22150	0.27	+1.1
4,799,299	-		PS417_22150	0.27	+0.7
4,799,299	-		PS417_22150	0.27	+1.3
4,799,579	-		PS417_22150	0.49	+1.1
4,799,694	+		PS417_22150	0.58	-0.6
4,799,776	+		PS417_22150	0.65	+1.7
4,799,823	-		PS417_22150	0.69	+0.3
4,799,865	+		PS417_22150	0.72	+3.5
4,800,165	+				+0.3
4,800,257	-				-0.8
4,800,281	+				+2.1
4,800,282	-				-0.4
4,800,282	-				+0.0
4,800,414	-				-0.4
4,800,414	-				+0.1
4,800,453	-		PS417_22155	0.14	+0.1
4,800,533	+		PS417_22155	0.24	+0.4
4,801,163	+				-0.2
4,801,163	+				-1.9
4,801,180	+				-0.7
4,801,180	+				-0.9
4,801,180	+				-0.3
4,801,180	+				+0.2
4,801,180	+				-2.3
4,801,181	-				+0.6
4,801,181	-				-2.6