Strain Fitness in Pseudomonas simiae WCS417 around PS417_21125

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,595,831	-				+0.7
4,595,831	-				+0.2
4,595,837	+				-1.7
4,595,838	-				+1.2
4,595,867	+				+1.1
4,595,868	-				-0.3
4,595,878	+				-0.1
4,596,045	+				-0.1
4,596,045	+				+1.4
4,596,045	+				-0.0
4,596,046	-				+0.7
4,596,143	+		PS417_21120	0.25	-0.0
4,596,144	-		PS417_21120	0.26	-1.3
4,596,144	-		PS417_21120	0.26	-0.7
4,596,173	+		PS417_21120	0.30	+0.0
4,596,231	-		PS417_21120	0.40	+0.3
4,596,488	+		PS417_21120	0.81	+0.5
4,596,488	+		PS417_21120	0.81	-1.1
4,596,489	-		PS417_21120	0.81	+1.2
4,596,507	+		PS417_21120	0.84	+0.8
4,596,620	+				+0.1
4,596,621	-				-1.3
4,596,702	-				+0.9
4,596,717	+				-1.7
4,596,717	+				+1.1
4,596,717	+				-0.7
4,596,718	-				-1.7
4,596,795	+				+0.1
4,596,932	-		PS417_21125	0.24	-3.1
4,596,969	+		PS417_21125	0.29	-1.3
4,596,989	-		PS417_21125	0.32	+0.1
4,597,080	+		PS417_21125	0.44	-1.9
4,597,081	-		PS417_21125	0.44	-2.5
4,597,255	+		PS417_21125	0.68	-3.6
4,597,257	+		PS417_21125	0.68	+0.7
4,597,257	+		PS417_21125	0.68	-5.0
4,597,257	+		PS417_21125	0.68	-1.8
4,597,257	+		PS417_21125	0.68	-2.9
4,597,258	-		PS417_21125	0.68	-0.9
4,597,329	+		PS417_21125	0.78	+1.1
4,597,329	+		PS417_21125	0.78	-5.3
4,597,488	+				+0.8
4,597,507	+				-1.9
4,597,507	+				-0.8
4,597,508	-				-0.7
4,597,617	-				-1.1
4,597,617	-				-1.6
4,597,648	+				-0.7
4,597,648	+				-0.3
4,597,648	+				+0.8
4,597,752	+				-1.2
4,597,757	-				+0.1
4,597,788	+				+0.9
4,597,789	-				-1.3
4,597,798	-				+0.4
4,597,844	-				-1.2
4,598,165	+		PS417_21130	0.13	-1.4
4,598,165	+		PS417_21130	0.13	-1.7
4,598,166	-		PS417_21130	0.13	+0.3
4,598,186	+		PS417_21130	0.15	-1.3
4,598,186	+		PS417_21130	0.15	-1.0
4,598,186	+		PS417_21130	0.15	+1.9
4,598,186	+				-1.1
4,598,249	+		PS417_21130	0.19	-0.4
4,598,249	+		PS417_21130	0.19	+0.2
4,598,273	+		PS417_21130	0.20	-0.0
4,598,274	-		PS417_21130	0.20	-1.1
4,598,274	-		PS417_21130	0.20	-2.1
4,598,274	-		PS417_21130	0.20	-1.2
4,598,275	+		PS417_21130	0.20	+0.0
4,598,275	+		PS417_21130	0.20	-2.9
4,598,275	+		PS417_21130	0.20	-0.5
4,598,276	-		PS417_21130	0.20	-2.0
4,598,276	-		PS417_21130	0.20	-0.7
4,598,276	-		PS417_21130	0.20	+0.1
4,598,400	-		PS417_21130	0.28	+0.7
4,598,459	+		PS417_21130	0.32	-0.7