Strain Fitness in Pseudomonas simiae WCS417 around PS417_20410

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,426,713	+				-0.5
4,426,713	+				+0.0
4,426,729	-				-2.6
4,426,738	+				+0.3
4,426,739	-				-0.9
4,426,741	+				-0.2
4,426,833	+				+0.3
4,426,833	+				-3.1
4,426,833	+				+1.7
4,426,834	-				-2.0
4,426,834	-				-0.0
4,426,834	-				-1.4
4,426,894	+				+0.2
4,426,894	+				-0.8
4,426,895	-				+3.9
4,426,895	-				-0.5
4,426,902	+				-0.3
4,427,022	+				+0.1
4,427,052	+				+0.1
4,427,053	-				-0.8
4,427,200	+				-2.2
4,427,218	+				+0.6
4,427,219	-				-0.7
4,427,229	+				-1.5
4,427,229	+				-0.4
4,427,230	-				+0.9
4,427,243	+				+1.0
4,427,277	-				-0.4
4,427,281	+				+0.5
4,427,282	-		PS417_20405	0.10	-1.3
4,427,400	-		PS417_20405	0.55	-0.6
4,427,400	-		PS417_20405	0.55	-0.0
4,427,428	+		PS417_20405	0.66	+0.6
4,427,429	-		PS417_20405	0.66	-0.4
4,427,475	+		PS417_20405	0.84	-1.2
4,427,475	+		PS417_20405	0.84	-0.5
4,427,476	-		PS417_20405	0.84	-0.6
4,427,476	-		PS417_20405	0.84	-1.2
4,427,476	-		PS417_20405	0.84	-0.0
4,427,486	+		PS417_20405	0.88	-1.2
4,427,486	+		PS417_20405	0.88	-0.5
4,427,486	+		PS417_20405	0.88	-0.3
4,427,487	-		PS417_20405	0.89	-0.1
4,427,487	-		PS417_20405	0.89	+0.9
4,427,487	-		PS417_20405	0.89	-0.3
4,427,487	-		PS417_20405	0.89	+0.1
4,427,489	+		PS417_20405	0.89	-0.2
4,427,489	+		PS417_20405	0.89	+0.1
4,427,489	+		PS417_20405	0.89	-0.5
4,427,490	-		PS417_20405	0.90	-0.4
4,427,539	+				-2.0
4,427,617	-				-1.0
4,427,629	+				+2.2
4,427,630	-				-0.2
4,427,630	-				-0.6
4,427,630	-				-1.3
4,427,712	+		PS417_20410	0.19	+1.3
4,427,713	-		PS417_20410	0.20	-0.4
4,427,713	-		PS417_20410	0.20	+1.2
4,427,731	+		PS417_20410	0.25	+0.6
4,427,731	+		PS417_20410	0.25	-0.3
4,427,732	-		PS417_20410	0.26	-0.0
4,427,812	+		PS417_20410	0.52	-1.2
4,427,812	+		PS417_20410	0.52	-0.5
4,427,812	+		PS417_20410	0.52	+0.5
4,427,857	+		PS417_20410	0.67	-0.0
4,427,857	+		PS417_20410	0.67	+2.4
4,427,858	-		PS417_20410	0.67	-0.5
4,427,858	-		PS417_20410	0.67	+1.2
4,427,974	+				+0.5
4,427,975	-				+2.0
4,427,975	-				+0.0
4,428,203	-				-1.3
4,428,332	+				-1.2
4,428,352	-				-0.7
4,428,356	-				-1.5
4,428,356	-				+1.7
4,428,366	+				-0.2
4,428,423	+				-2.6
4,428,508	-				-0.7
4,428,569	+				-1.2
4,428,601	-		PS417_20415	0.10	-1.5