Strain Fitness in Pseudomonas simiae WCS417 around PS417_19300

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,185,678	+		PS417_19290	0.88	+0.7
4,185,679	-		PS417_19290	0.88	-3.5
4,185,699	+		PS417_19290	0.89	-0.5
4,185,700	-				+0.0
4,185,832	+				-0.7
4,185,844	+				-0.4
4,185,844	+				+1.6
4,185,865	+				+0.2
4,185,865	+				-0.3
4,185,911	-				+0.6
4,185,937	-				-1.9
4,185,937	-				+0.2
4,185,959	-				-0.6
4,185,959	-				-0.3
4,186,038	-				+1.2
4,186,202	-				-1.6
4,186,276	+		PS417_19295	0.11	+1.7
4,186,287	+		PS417_19295	0.15	-0.1
4,186,287	+		PS417_19295	0.15	+0.2
4,186,287	+		PS417_19295	0.15	+0.3
4,186,288	-		PS417_19295	0.15	-0.1
4,186,288	-		PS417_19295	0.15	+0.2
4,186,288	-		PS417_19295	0.15	-0.1
4,186,655	+		PS417_19300	0.26	+0.4
4,186,698	+		PS417_19300	0.42	+2.2
4,186,699	-		PS417_19300	0.43	+0.2
4,186,699	-		PS417_19300	0.43	-0.5
4,186,787	+		PS417_19300	0.75	-1.2
4,186,788	-		PS417_19300	0.76	+3.4
4,186,820	-		PS417_19300	0.87	+0.3
4,186,839	-				-0.2
4,186,854	+				-1.0
4,186,886	+				+0.2
4,186,908	-				+1.6
4,186,920	+				+0.2
4,186,922	+				+0.2
4,186,922	+				+0.2
4,186,922	+				-0.0
4,186,923	-				+1.7
4,186,945	+				+1.1
4,186,946	-				-0.2
4,186,946	-				+0.3
4,186,946	-				-0.8
4,186,949	+				-0.0
4,186,949	+				+0.6
4,186,949	+				-0.1
4,186,949	+				-0.8
4,186,981	+				-0.5
4,186,997	-				+1.6
4,187,006	+				-0.6
4,187,007	-				+1.3
4,187,137	+		PS417_19305	0.13	-0.4
4,187,197	+		PS417_19305	0.25	+0.2
4,187,246	+		PS417_19305	0.34	+0.3
4,187,246	+		PS417_19305	0.34	-2.1
4,187,246	+		PS417_19305	0.34	+1.2
4,187,246	+		PS417_19305	0.34	-0.7
4,187,247	-		PS417_19305	0.34	-0.7
4,187,251	-		PS417_19305	0.35	+2.6
4,187,566	+				-0.3
4,187,567	-				-1.2
4,187,578	-				+0.3
4,187,589	+				+0.8
4,187,590	-				+0.6
4,187,709	+				-0.4
4,187,710	-		PS417_19310	0.10	+0.0
4,187,720	+		PS417_19310	0.11	+0.3
4,187,763	-		PS417_19310	0.15	-1.2