Strain Fitness in Pseudomonas simiae WCS417 around PS417_19230

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,171,867	+		PS417_19225	0.63	-1.3
4,172,100	+		PS417_19225	0.74	-1.0
4,172,100	+		PS417_19225	0.74	+1.6
4,172,101	-		PS417_19225	0.74	+1.3
4,172,101	-		PS417_19225	0.74	+1.7
4,172,310	+		PS417_19225	0.85	-0.3
4,172,361	+		PS417_19225	0.87	-0.5
4,172,362	-		PS417_19225	0.87	-1.2
4,172,375	+		PS417_19225	0.88	+0.6
4,172,427	+				-1.7
4,172,428	-				-0.8
4,172,578	+				-1.0
4,172,645	-				-3.3
4,172,667	-				+0.5
4,172,750	-				+0.8
4,172,760	+				-1.0
4,172,985	-		PS417_19230	0.13	+1.0
4,172,985	-		PS417_19230	0.13	+0.1
4,172,985	-		PS417_19230	0.13	+0.3
4,173,036	-		PS417_19230	0.16	-1.1
4,173,192	-		PS417_19230	0.25	-0.3
4,173,192	-		PS417_19230	0.25	-1.2
4,173,260	-		PS417_19230	0.29	-2.6
4,173,296	+		PS417_19230	0.31	+0.3
4,173,296	+		PS417_19230	0.31	+4.2
4,173,332	-		PS417_19230	0.33	+0.8
4,173,696	-		PS417_19230	0.53	-0.4
4,173,717	+		PS417_19230	0.55	+0.7
4,173,718	-		PS417_19230	0.55	+0.5
4,173,810	-		PS417_19230	0.60	+1.1
4,173,810	-		PS417_19230	0.60	-1.0
4,174,108	-		PS417_19230	0.77	+0.8
4,174,548	-				+1.6
4,174,548	-				-1.2
4,174,583	+				+0.6
4,174,583	+				-0.7
4,174,681	+				-1.0
4,174,682	-				-0.4
4,174,754	+		PS417_19235	0.13	+0.8
4,174,776	+		PS417_19235	0.14	+0.0
4,174,800	+		PS417_19235	0.16	+0.3
4,174,928	+		PS417_19235	0.23	-0.3
4,174,928	+		PS417_19235	0.23	+1.8
4,175,043	+				-0.4
4,175,195	+		PS417_19235	0.39	-0.3
4,175,214	+		PS417_19235	0.40	+0.4
4,175,351	+		PS417_19235	0.48	-1.4
4,175,398	-		PS417_19235	0.50	+0.4
4,175,425	-		PS417_19235	0.52	-1.0
4,175,428	+		PS417_19235	0.52	+1.4
4,175,429	-		PS417_19235	0.52	-0.8