Strain Fitness in Pseudomonas simiae WCS417 around PS417_17330

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,786,178	+		PS417_17325	0.41	+0.5
3,786,178	+		PS417_17325	0.41	+0.7
3,786,394	+		PS417_17325	0.56	-1.9
3,786,394	+				+0.1
3,786,602	+		PS417_17325	0.72	-1.1
3,787,009	+				-0.4
3,787,074	+				-0.9
3,787,075	-				-1.7
3,787,075	-				+0.1
3,787,180	-		PS417_17330	0.15	+3.5
3,787,455	+		PS417_17330	0.36	-2.4
3,787,891	+		PS417_17330	0.71	-0.5
3,787,974	+		PS417_17330	0.77	-0.5
3,787,989	-		PS417_17330	0.78	+1.7
3,788,109	-		PS417_17330	0.88	+1.7
3,788,263	-				-0.6
3,788,323	+				-0.4
3,788,323	+				+0.2
3,788,323	+				-0.4
3,788,431	+				+0.2
3,788,507	+		PS417_17335	0.20	-0.6
3,788,508	-		PS417_17335	0.20	-0.2
3,788,534	+		PS417_17335	0.24	-0.5
3,788,534	+		PS417_17335	0.24	-0.5
3,788,534	+		PS417_17335	0.24	+1.6
3,788,535	-		PS417_17335	0.24	+0.2
3,788,736	-		PS417_17335	0.57	+1.5
3,788,828	+		PS417_17335	0.72	+0.7
3,788,852	+		PS417_17335	0.76	-1.8
3,788,852	+		PS417_17335	0.76	-0.3
3,788,852	+		PS417_17335	0.76	+0.3
3,788,852	+		PS417_17335	0.76	+0.9
3,788,852	+		PS417_17335	0.76	+0.2
3,788,853	-		PS417_17335	0.76	-0.1
3,788,853	-				-1.4
3,788,918	+				-0.6
3,788,919	-		PS417_17335	0.86	+0.9
3,789,152	+				-0.2