Strain Fitness in Pseudomonas simiae WCS417 around PS417_16145

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,539,325	-				-0.2
3,539,391	+				+0.8
3,539,391	+				+0.0
3,539,391	+				+0.0
3,539,392	-				-0.3
3,539,399	-				-0.7
3,539,475	+				+1.7
3,539,663	-		PS417_16140	0.31	-0.9
3,540,153	-				+0.6
3,540,182	+				-0.4
3,540,305	+		PS417_16145	0.11	+0.3
3,540,310	-		PS417_16145	0.11	-0.2
3,540,310	-		PS417_16145	0.11	-0.3
3,540,436	+				-0.5
3,540,436	+		PS417_16145	0.24	+2.6
3,540,436	+		PS417_16145	0.24	+1.6
3,540,508	+		PS417_16145	0.31	+1.1
3,540,772	+		PS417_16145	0.58	+0.7
3,540,815	+		PS417_16145	0.62	+0.2
3,540,815	+		PS417_16145	0.62	+0.8
3,540,816	-		PS417_16145	0.62	+0.9
3,540,827	+		PS417_16145	0.63	+0.8
3,540,828	-		PS417_16145	0.64	-0.7
3,541,004	+		PS417_16145	0.81	+0.2
3,541,005	-		PS417_16145	0.81	+0.7
3,541,266	+				-0.1
3,541,266	+				+0.9
3,541,266	+				-1.1