Strain Fitness in Pseudomonas simiae WCS417 around PS417_15980

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,501,403	-				+1.2
3,501,403	-		PS417_15975	0.43	-2.5
3,501,662	+		PS417_15975	0.64	+0.0
3,501,711	-		PS417_15975	0.68	-1.6
3,501,995	+				+1.7
3,502,517	+		PS417_15980	0.34	+1.2
3,502,518	-				+1.1
3,502,518	-		PS417_15980	0.34	-0.5
3,502,687	-		PS417_15980	0.50	-0.1
3,502,770	-		PS417_15980	0.58	-1.2
3,502,987	+		PS417_15980	0.78	-2.7
3,502,988	-		PS417_15980	0.79	+2.1
3,502,988	-		PS417_15980	0.79	-0.6
3,502,988	-		PS417_15980	0.79	-0.8
3,503,112	-				-0.2
3,503,169	-				-0.5
3,503,169	-				+1.0
3,503,169	-				+0.7
3,503,169	-				-0.7
3,503,169	-				-0.1
3,503,249	+				+0.5
3,503,417	-		PS417_15985	0.19	-0.4
3,503,417	-		PS417_15985	0.19	-1.3
3,503,422	+		PS417_15985	0.20	+0.2
3,503,653	+		PS417_15985	0.57	-1.8
3,503,654	-		PS417_15985	0.57	-1.0
3,503,672	-		PS417_15985	0.60	-0.9
3,503,672	-		PS417_15985	0.60	+0.2
3,503,672	-		PS417_15985	0.60	-0.6
3,503,767	+		PS417_15985	0.75	-0.5
3,503,894	-				-2.0
3,504,000	-				+1.7
3,504,076	+				+0.5
3,504,077	-				-0.1