Strain Fitness in Pseudomonas simiae WCS417 around PS417_15575

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,411,857	+		PS417_15570	0.63	-0.4
3,411,857	+		PS417_15570	0.63	+1.7
3,411,857	+		PS417_15570	0.63	+1.5
3,411,858	-		PS417_15570	0.63	+0.1
3,411,858	-		PS417_15570	0.63	+0.5
3,411,858	-		PS417_15570	0.63	-1.1
3,411,858	-		PS417_15570	0.63	-0.2
3,412,003	-		PS417_15570	0.69	-0.3
3,412,303	-		PS417_15570	0.81	+0.2
3,412,303	-		PS417_15570	0.81	-1.3
3,412,371	+		PS417_15570	0.83	+0.4
3,412,414	-		PS417_15570	0.85	-0.4
3,412,414	-		PS417_15570	0.85	+0.0
3,412,612	-				-1.1
3,413,044	+		PS417_15575	0.15	+0.5
3,413,091	-		PS417_15575	0.18	-1.9
3,413,194	-		PS417_15575	0.24	+0.1
3,413,234	+		PS417_15575	0.26	-0.5
3,413,235	-		PS417_15575	0.26	+0.4
3,413,436	-		PS417_15575	0.38	-0.8
3,413,593	-		PS417_15575	0.47	-0.4
3,413,675	+		PS417_15575	0.52	-0.7
3,413,676	-		PS417_15575	0.52	-0.1
3,413,679	+		PS417_15575	0.52	+0.2
3,413,679	+		PS417_15575	0.52	-1.0
3,413,679	+		PS417_15575	0.52	-1.0
3,413,679	+		PS417_15575	0.52	+0.5
3,413,680	-		PS417_15575	0.52	-0.3
3,413,680	-		PS417_15575	0.52	+1.1
3,413,680	-		PS417_15575	0.52	-0.6
3,414,098	+		PS417_15575	0.77	+0.5
3,414,098	+		PS417_15575	0.77	-0.1
3,414,257	+		PS417_15575	0.86	-0.9
3,414,287	+		PS417_15575	0.88	+0.1
3,414,288	-		PS417_15575	0.88	+1.0
3,414,308	+		PS417_15575	0.89	-0.5
3,414,308	+		PS417_15575	0.89	-0.8
3,414,309	-		PS417_15575	0.89	+0.2
3,414,568	+				+0.2
3,414,569	-				+1.1
3,414,569	-				+0.1
3,414,569	-				+1.1
3,414,571	-				-0.6
3,414,571	-				-0.9
3,414,573	-				+0.2
3,414,573	-				-0.2
3,414,573	-				+1.2
3,414,573	-				+0.3
3,414,573	-				-2.1
3,414,573	-				-0.7
3,414,577	+				-1.1
3,415,097	+		PS417_15580	0.16	+1.7
3,415,097	+		PS417_15580	0.16	+0.8
3,415,098	-		PS417_15580	0.16	-0.2
3,415,429	-		PS417_15580	0.27	+0.4