Strain Fitness in Pseudomonas simiae WCS417 around PS417_15125
Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,311,026 | + | -0.8 | |||
3,311,123 | + | -0.6 | |||
3,311,123 | + | +1.0 | |||
3,311,124 | - | +0.9 | |||
3,311,349 | + | PS417_15125 | 0.41 | -2.0 | |
3,311,409 | - | PS417_15125 | 0.51 | +1.9 | |
3,311,526 | - | PS417_15125 | 0.71 | +0.8 | |
3,311,696 | + | -1.3 | |||
3,311,784 | - | -0.4 | |||
3,312,047 | + | PS417_15135 | 0.37 | -0.4 | |
3,312,048 | - | PS417_15135 | 0.38 | +2.1 | |
3,312,267 | + | -0.6 | |||
3,312,268 | - | +0.0 | |||
3,312,590 | + | PS417_15140 | 0.23 | -0.5 | |
3,312,591 | - | PS417_15140 | 0.23 | +0.2 |
Or see this region's nucleotide sequence