Strain Fitness in Pseudomonas simiae WCS417 around PS417_13750

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,019,344	+		PS417_13745	0.12	+1.2
3,019,344	+		PS417_13745	0.12	+0.4
3,019,344	+		PS417_13745	0.12	-0.1
3,019,344	+		PS417_13745	0.12	+0.1
3,019,345	-		PS417_13745	0.12	+0.6
3,019,345	-		PS417_13745	0.12	+1.0
3,019,451	+		PS417_13745	0.26	+1.0
3,019,451	+		PS417_13745	0.26	-1.6
3,019,520	-		PS417_13745	0.35	-0.3
3,019,523	+		PS417_13745	0.36	-0.8
3,019,523	+		PS417_13745	0.36	+1.8
3,019,523	+		PS417_13745	0.36	-0.3
3,019,523	+		PS417_13745	0.36	-0.4
3,019,524	-		PS417_13745	0.36	-0.5
3,019,524	-		PS417_13745	0.36	-0.7
3,019,524	-		PS417_13745	0.36	-0.4
3,019,524	-		PS417_13745	0.36	-0.4
3,019,524	-		PS417_13745	0.36	-1.3
3,019,524	-		PS417_13745	0.36	+0.2
3,019,524	-		PS417_13745	0.36	-0.3
3,019,527	+		PS417_13745	0.36	-2.5
3,019,527	+		PS417_13745	0.36	-1.2
3,019,527	+		PS417_13745	0.36	+0.8
3,019,672	+		PS417_13745	0.55	+1.5
3,019,672	+		PS417_13745	0.55	+0.4
3,019,672	+				-0.8
3,019,672	+		PS417_13745	0.55	-2.8
3,019,673	-		PS417_13745	0.56	+0.2
3,019,714	+		PS417_13745	0.61	-0.0
3,019,715	-		PS417_13745	0.61	-0.7
3,019,715	-		PS417_13745	0.61	+0.2
3,019,715	-		PS417_13745	0.61	-0.0
3,019,715	-		PS417_13745	0.61	-1.2
3,019,796	-		PS417_13745	0.72	-0.0
3,019,796	-		PS417_13745	0.72	+1.2
3,019,816	+		PS417_13745	0.74	-0.2
3,019,991	+				+0.4
3,020,000	+				+2.1
3,020,000	+				+0.1
3,020,001	-				+1.8
3,020,001	-				+0.6
3,020,033	-				-0.2
3,020,033	-				+0.3
3,020,077	+				-3.2
3,020,198	+				+0.6
3,020,198	+				-0.8
3,020,198	+				-2.2
3,020,198	+				+0.7
3,020,199	-				-0.1
3,020,220	-				+2.1
3,020,230	-				-0.2
3,020,274	-		PS417_13750	0.15	+0.2
3,020,327	+		PS417_13750	0.26	+1.2
3,020,328	-		PS417_13750	0.26	+1.9
3,020,328	-		PS417_13750	0.26	+0.6
3,020,383	+		PS417_13750	0.38	+0.7
3,020,398	+		PS417_13750	0.41	+0.2
3,020,399	-		PS417_13750	0.41	-0.3
3,020,399	-		PS417_13750	0.41	-1.0
3,020,399	-		PS417_13750	0.41	+0.6
3,020,402	+		PS417_13750	0.42	-1.7
3,020,402	+				-1.5
3,020,403	-				+0.5
3,020,500	+		PS417_13750	0.62	+1.2
3,020,516	-		PS417_13750	0.66	+0.2
3,020,516	-				+0.2
3,020,539	+		PS417_13750	0.71	+0.3
3,020,616	-				-1.0
3,020,653	+				+0.6
3,020,654	-				-0.2
3,020,700	-				+0.9
3,020,774	+				-1.3
3,020,775	-				+0.1
3,020,813	-				-1.7
3,020,835	-				+0.7
3,020,851	+				-2.3
3,020,852	-				+0.7
3,020,980	+				-0.7
3,020,980	+				-0.2
3,021,002	+				-0.3
3,021,071	+				+0.5
3,021,079	+				+1.5
3,021,079	+				+0.7
3,021,109	+				-2.3
3,021,109	+				+0.4
3,021,129	-				+0.3
3,021,195	+				-0.6
3,021,196	-				+2.4
3,021,610	+		PS417_13755	0.40	-0.5