Strain Fitness in Pseudomonas simiae WCS417 around PS417_12095

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,625,342	+				+0.1
2,625,343	-				-1.2
2,625,415	-		PS417_12085	0.30	-0.2
2,625,501	+		PS417_12085	0.56	+0.1
2,625,501	+		PS417_12085	0.56	-2.4
2,625,565	+				+0.1
2,625,565	+		PS417_12085	0.75	-0.0
2,625,565	+		PS417_12085	0.75	-2.0
2,625,565	+		PS417_12085	0.75	+0.6
2,625,565	+		PS417_12085	0.75	-0.4
2,625,566	-		PS417_12085	0.75	+0.8
2,625,642	+				+0.8
2,625,643	-				-2.3
2,625,838	+		PS417_12090	0.50	-0.0
2,625,839	-		PS417_12090	0.50	+1.0
2,625,839	-		PS417_12090	0.50	-0.7
2,625,839	-		PS417_12090	0.50	-0.4
2,626,245	+				-0.7
2,626,319	+				-1.6
2,626,713	+		PS417_12095	0.49	-2.5
2,626,713	+		PS417_12095	0.49	+0.2
2,626,831	-		PS417_12095	0.63	+2.9
2,626,851	+		PS417_12095	0.65	+0.2
2,626,851	+		PS417_12095	0.65	-0.5
2,626,852	-		PS417_12095	0.65	-0.1
2,626,852	-		PS417_12095	0.65	+2.1
2,626,852	-		PS417_12095	0.65	-3.2
2,626,912	-		PS417_12095	0.73	-1.0
2,626,912	-		PS417_12095	0.73	+0.7
2,626,912	-		PS417_12095	0.73	+1.4
2,626,974	+				-1.2
2,627,067	+				+3.5
2,627,068	-				-0.5
2,627,099	-				-0.2
2,627,099	-				+0.9
2,627,143	-				-0.1
2,627,185	+				+0.1
2,627,202	+				-0.3
2,627,203	-				+0.4
2,627,373	+		PS417_12100	0.27	-0.0
2,627,374	-		PS417_12100	0.27	-0.9
2,627,394	-				-0.3
2,627,424	+		PS417_12100	0.34	-3.3
2,627,424	+		PS417_12100	0.34	+0.4
2,627,425	-		PS417_12100	0.35	-0.1
2,627,505	+		PS417_12100	0.47	-0.1
2,627,505	+				+2.7
2,627,718	+		PS417_12100	0.79	-0.1
2,627,718	+		PS417_12100	0.79	-0.8
2,627,718	+		PS417_12100	0.79	+0.1
2,627,719	-		PS417_12100	0.79	+1.7
2,627,721	+		PS417_12100	0.79	-0.9
2,627,722	-		PS417_12100	0.79	-1.1
2,627,787	+		PS417_12100	0.89	-1.9
2,627,873	+				-2.0
2,627,948	+		PS417_12105	0.12	+0.3
2,627,968	+		PS417_12105	0.15	-2.3
2,628,015	-		PS417_12105	0.22	-1.6
2,628,050	+		PS417_12105	0.27	-0.8
2,628,051	-		PS417_12105	0.27	-1.8
2,628,084	+		PS417_12105	0.32	-0.2
2,628,105	-		PS417_12105	0.35	-0.3