Strain Fitness in Pseudomonas simiae WCS417 around PS417_10945

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,340,628	-		PS417_10940	0.12	-2.1
2,340,639	+		PS417_10940	0.13	-0.1
2,340,640	-		PS417_10940	0.13	+0.1
2,340,640	-		PS417_10940	0.13	+0.3
2,340,640	-		PS417_10940	0.13	+0.1
2,340,715	-		PS417_10940	0.21	-0.9
2,341,059	+		PS417_10940	0.55	+0.1
2,341,064	-		PS417_10940	0.56	-0.6
2,341,134	+		PS417_10940	0.63	+1.0
2,341,135	-		PS417_10940	0.63	-2.7
2,341,171	-		PS417_10940	0.66	-0.3
2,341,254	-				+2.2
2,341,368	+		PS417_10940	0.86	-0.2
2,341,511	-				+0.2
2,341,524	-				-0.0
2,341,617	-				+1.9
2,341,844	-		PS417_10945	0.18	+0.0
2,341,922	+		PS417_10945	0.24	+0.1
2,342,159	+				-1.3
2,342,201	+		PS417_10945	0.45	-0.1
2,342,375	+		PS417_10945	0.58	+0.5
2,342,375	+		PS417_10945	0.58	+1.7
2,342,375	+		PS417_10945	0.58	-0.4
2,342,636	+		PS417_10945	0.78	-0.0
2,342,636	+		PS417_10945	0.78	-0.3
2,342,637	-		PS417_10945	0.78	-1.4
2,342,640	-		PS417_10945	0.78	-1.5
2,342,754	+		PS417_10945	0.87	-0.2
2,342,919	-				-2.9
2,342,937	+				-0.8
2,342,960	+				-1.8
2,342,964	-				+1.4
2,343,155	+				-0.2
2,343,329	+		PS417_10950	0.22	-0.1
2,343,329	+		PS417_10950	0.22	+0.5
2,343,383	+		PS417_10950	0.27	+0.4
2,343,383	+		PS417_10950	0.27	-0.2
2,343,383	+		PS417_10950	0.27	-1.4
2,343,384	-		PS417_10950	0.27	-0.9
2,343,384	-		PS417_10950	0.27	-1.1
2,343,404	+		PS417_10950	0.29	-0.3
2,343,405	-		PS417_10950	0.29	+2.7
2,343,405	-		PS417_10950	0.29	-1.8
2,343,625	+		PS417_10950	0.48	+1.3
2,343,625	+		PS417_10950	0.48	-0.2
2,343,625	+		PS417_10950	0.48	-0.4
2,343,626	-		PS417_10950	0.48	+0.1
2,343,822	+		PS417_10950	0.64	-0.2
2,343,823	-		PS417_10950	0.64	+0.0