Strain Fitness in Pseudomonas simiae WCS417 around PS417_10580

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,258,593	+		PS417_10575	0.19	-0.2
2,258,915	-		PS417_10575	0.48	-0.1
2,259,260	-		PS417_10575	0.79	+0.2
2,259,509	-				+0.9
2,260,039	+		PS417_10580	0.39	+0.1
2,260,039	+		PS417_10580	0.39	-1.1
2,260,040	-		PS417_10580	0.40	-1.1
2,260,084	+				-0.9
2,260,085	-		PS417_10580	0.43	-2.8
2,260,244	+		PS417_10580	0.55	-0.4
2,260,245	-		PS417_10580	0.55	-0.7
2,260,319	+		PS417_10580	0.60	+0.8
2,260,408	+		PS417_10580	0.67	-1.0
2,260,627	+				-0.7
2,260,783	+				-0.3
2,260,866	+				-1.8
2,260,866	+				+0.1
2,260,867	-				-2.5
2,260,873	-				-0.3
2,261,154	+		PS417_10585	0.52	+0.2
2,261,155	-		PS417_10585	0.52	-0.0
2,261,218	-		PS417_10585	0.63	-0.7
2,261,223	+		PS417_10585	0.64	-0.5
2,261,224	-		PS417_10585	0.64	+0.1