Strain Fitness in Pseudomonas simiae WCS417 around PS417_10465

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,233,482	+				+0.7
2,233,482	+				-0.2
2,233,482	+				-0.9
2,233,685	+		PS417_10460	0.26	-0.2
2,233,685	+		PS417_10460	0.26	-0.2
2,233,685	+		PS417_10460	0.26	-1.2
2,233,685	+		PS417_10460	0.26	-0.6
2,233,685	+		PS417_10460	0.26	-1.7
2,233,685	+		PS417_10460	0.26	-0.3
2,233,686	-		PS417_10460	0.26	-1.5
2,233,686	-		PS417_10460	0.26	+0.6
2,233,686	-		PS417_10460	0.26	+0.8
2,233,686	-		PS417_10460	0.26	-0.4
2,233,686	-		PS417_10460	0.26	-0.5
2,233,892	-		PS417_10460	0.46	-0.1
2,233,931	+		PS417_10460	0.50	-0.4
2,233,931	+		PS417_10460	0.50	+0.2
2,233,931	+		PS417_10460	0.50	-0.1
2,234,029	+		PS417_10460	0.60	-0.4
2,234,198	+		PS417_10460	0.76	-0.4
2,234,199	-		PS417_10460	0.76	-0.6
2,234,199	-		PS417_10460	0.76	+0.3
2,234,215	+		PS417_10460	0.78	+0.6
2,234,216	-		PS417_10460	0.78	-0.1
2,234,249	+		PS417_10460	0.81	-0.0
2,234,285	-		PS417_10460	0.84	-2.7
2,234,434	-				-1.0
2,234,602	+		PS417_10465	0.14	+0.8
2,234,603	-		PS417_10465	0.14	+2.7
2,234,817	+		PS417_10465	0.34	-0.0
2,235,151	+		PS417_10465	0.64	+0.1
2,235,211	+		PS417_10465	0.70	+0.5
2,235,211	+		PS417_10465	0.70	-0.3
2,235,211	+		PS417_10465	0.70	+0.5
2,235,246	-		PS417_10465	0.73	-0.3
2,235,304	-		PS417_10465	0.78	+0.5
2,235,434	-				-0.4
2,235,436	+				+0.3
2,235,437	-				-2.0
2,235,448	+				+0.3
2,235,845	+		PS417_10470	0.18	+1.1
2,235,849	+		PS417_10470	0.19	-0.1
2,235,849	+		PS417_10470	0.19	+0.1
2,236,179	+		PS417_10470	0.50	+0.2
2,236,371	-		PS417_10470	0.68	-0.8
2,236,486	+		PS417_10470	0.79	+0.2
2,236,499	-		PS417_10470	0.80	-0.9