Strain Fitness in Pseudomonas simiae WCS417 around PS417_09645

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,090,101	+		PS417_09640	0.68	+0.8
2,090,102	-		PS417_09640	0.68	+0.1
2,090,193	+		PS417_09640	0.74	-0.4
2,090,193	+		PS417_09640	0.74	-0.4
2,090,193	+		PS417_09640	0.74	+0.1
2,090,193	+		PS417_09640	0.74	-0.0
2,090,194	-				+2.7
2,090,334	+		PS417_09640	0.84	-0.8
2,090,334	+		PS417_09640	0.84	-0.7
2,090,335	-		PS417_09640	0.84	-0.7
2,090,359	+		PS417_09640	0.86	-1.7
2,090,360	-		PS417_09640	0.86	-0.5
2,090,613	-				-0.4
2,090,630	+				+0.1
2,090,661	-				-0.7
2,090,716	+				-2.0
2,090,735	+				-2.7
2,090,861	+				-0.3
2,090,861	+				+2.0
2,090,861	+				+1.1
2,090,862	-				-0.2
2,090,862	-				-0.0
2,090,880	+				+0.3
2,090,880	+				-1.7
2,090,954	-				-3.2
2,090,971	-				+0.8
2,090,971	-				-1.3
2,091,024	+				+1.2
2,091,314	+		PS417_09645	0.12	+0.1
2,091,314	+		PS417_09645	0.12	+1.5
2,091,314	+		PS417_09645	0.12	+0.2
2,091,314	+		PS417_09645	0.12	+0.2
2,091,314	+		PS417_09645	0.12	+4.3
2,091,314	+		PS417_09645	0.12	-0.1
2,091,315	-		PS417_09645	0.13	-2.7
2,091,315	-		PS417_09645	0.13	+0.7
2,091,315	-		PS417_09645	0.13	+0.7
2,091,377	+		PS417_09645	0.15	+0.4
2,091,377	+		PS417_09645	0.15	+0.5
2,091,377	+		PS417_09645	0.15	+1.3
2,091,377	+		PS417_09645	0.15	+1.5
2,091,378	-		PS417_09645	0.15	+0.4
2,091,470	+		PS417_09645	0.19	+0.3
2,091,471	-		PS417_09645	0.19	-2.0
2,091,509	+		PS417_09645	0.20	+1.5
2,091,605	+		PS417_09645	0.24	+0.6
2,091,605	+		PS417_09645	0.24	+1.8
2,091,606	-		PS417_09645	0.24	-0.5
2,091,606	-		PS417_09645	0.24	-1.8
2,091,606	-		PS417_09645	0.24	+0.0
2,091,654	-		PS417_09645	0.26	-0.4
2,091,693	-		PS417_09645	0.28	+0.1
2,091,719	+		PS417_09645	0.29	+0.0
2,091,719	+		PS417_09645	0.29	-0.6
2,091,720	-		PS417_09645	0.29	-1.3
2,091,720	-		PS417_09645	0.29	-1.0
2,091,824	+		PS417_09645	0.33	-1.6
2,091,936	-		PS417_09645	0.38	+0.7
2,091,992	+		PS417_09645	0.40	-0.6
2,092,028	+		PS417_09645	0.41	-0.5
2,092,115	+				-1.3
2,092,116	-		PS417_09645	0.45	+0.4
2,092,116	-		PS417_09645	0.45	+1.8
2,092,116	-		PS417_09645	0.45	-0.2
2,092,116	-		PS417_09645	0.45	+0.0
2,092,145	+		PS417_09645	0.46	-0.6
2,092,163	+		PS417_09645	0.47	+0.3
2,092,193	+				+0.7
2,092,193	+		PS417_09645	0.48	+0.2
2,092,194	-		PS417_09645	0.48	-1.1
2,092,194	-		PS417_09645	0.48	+1.1
2,092,194	-		PS417_09645	0.48	-0.0
2,092,221	-		PS417_09645	0.49	-0.3
2,092,221	-		PS417_09645	0.49	+0.2
2,092,294	+		PS417_09645	0.52	-0.8
2,092,294	+		PS417_09645	0.52	+0.2
2,092,494	-		PS417_09645	0.60	+0.3
2,092,529	+		PS417_09645	0.61	+0.2
2,092,529	+		PS417_09645	0.61	+0.6
2,092,763	+		PS417_09645	0.71	-0.3
2,092,803	-		PS417_09645	0.72	+2.8
2,092,841	+		PS417_09645	0.74	-2.1
2,092,871	+		PS417_09645	0.75	-0.4
2,092,877	+		PS417_09645	0.75	+0.7
2,092,877	+				-2.1
2,092,877	+		PS417_09645	0.75	-0.9
2,092,878	-		PS417_09645	0.75	+0.0
2,092,901	+		PS417_09645	0.76	-2.5
2,092,902	-		PS417_09645	0.76	-0.8
2,093,051	+		PS417_09645	0.82	-2.0
2,093,052	-		PS417_09645	0.82	-0.1
2,093,699	+		PS417_09650	0.11	-0.2
2,093,699	+		PS417_09650	0.11	-0.5
2,093,699	+		PS417_09650	0.11	-0.2
2,093,700	-		PS417_09650	0.11	-0.5
2,093,700	-		PS417_09650	0.11	-1.2
2,094,022	+		PS417_09650	0.45	-0.4
2,094,073	-		PS417_09650	0.50	+1.1
2,094,246	-				+0.1
2,094,368	-		PS417_09650	0.81	+0.3
2,094,388	+		PS417_09650	0.84	-0.2