Strain Fitness in Pseudomonas simiae WCS417 around PS417_08760

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,904,417	+		PS417_08750	0.39	+0.3
1,904,846	+		PS417_08755	0.75	+0.5
1,904,957	-				-2.0
1,904,964	-				-1.1
1,904,985	+				-0.6
1,904,985	+				-0.2
1,905,079	-				-2.0
1,905,259	-				+0.1
1,905,263	-				+0.2
1,905,339	+				+0.1
1,905,339	+				-0.3
1,905,350	-				+0.3
1,905,408	+				+0.1
1,905,409	-				-0.7
1,905,409	-				-0.6
1,905,409	-				-0.7
1,905,409	-				+0.4
1,905,409	-				-1.3
1,905,437	-		PS417_08760	0.12	+0.1
1,905,743	-		PS417_08760	0.31	+1.0
1,905,817	+		PS417_08760	0.36	-2.1
1,905,818	-		PS417_08760	0.36	+0.5
1,905,818	-		PS417_08760	0.36	-0.3
1,905,949	+		PS417_08760	0.45	+0.4
1,905,950	-		PS417_08760	0.45	+0.2
1,906,353	-				+1.7
1,906,508	+		PS417_08760	0.80	+1.8
1,906,934	+				-0.4
1,906,934	+				-2.3
1,906,934	+				-0.1
1,906,935	-				+1.0
1,906,991	+		PS417_08765	0.14	+0.4
1,906,991	+		PS417_08765	0.14	+0.1
1,906,992	-		PS417_08765	0.14	+0.7
1,907,033	+		PS417_08765	0.18	+0.2
1,907,033	+		PS417_08765	0.18	+0.1
1,907,033	+		PS417_08765	0.18	-0.3
1,907,033	+		PS417_08765	0.18	+0.1
1,907,034	-		PS417_08765	0.18	-0.2
1,907,059	-		PS417_08765	0.20	-0.6
1,907,129	-		PS417_08765	0.26	-3.0
1,907,190	+		PS417_08765	0.32	+1.0
1,907,426	+		PS417_08765	0.52	+0.1
1,907,427	-		PS417_08765	0.52	+0.5