Strain Fitness in Pseudomonas simiae WCS417 around PS417_08005

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,750,036	-		PS417_08000	0.23	-0.2
1,750,059	-		PS417_08000	0.25	-2.8
1,750,086	-		PS417_08000	0.29	-1.1
1,750,086	-		PS417_08000	0.29	-2.3
1,750,086	-		PS417_08000	0.29	-2.9
1,750,121	+		PS417_08000	0.33	-2.7
1,750,122	-		PS417_08000	0.33	-2.1
1,750,268	+		PS417_08000	0.51	-1.6
1,750,412	+		PS417_08000	0.68	-3.1
1,750,412	+		PS417_08000	0.68	-0.8
1,750,412	+		PS417_08000	0.68	-0.6
1,750,413	-		PS417_08000	0.68	-0.1
1,750,413	-		PS417_08000	0.68	-1.9
1,750,413	-		PS417_08000	0.68	-1.1
1,750,523	+		PS417_08000	0.82	-2.9
1,750,524	-		PS417_08000	0.82	-0.0
1,750,551	+		PS417_08000	0.85	+0.1
1,750,552	-		PS417_08000	0.85	-1.6
1,750,579	+		PS417_08000	0.88	-2.3
1,750,579	+		PS417_08000	0.88	-1.9
1,750,579	+		PS417_08000	0.88	-0.7
1,750,580	-		PS417_08000	0.88	+0.1
1,750,602	+				-1.6
1,750,602	+				-2.9
1,750,602	+				-3.3
1,750,602	+				-3.5
1,750,603	-				-1.6
1,750,603	-				-0.2
1,750,603	-				-2.4
1,750,654	-				-1.8
1,750,770	-				-1.2
1,750,770	-				-0.3
1,750,834	+				-0.1
1,750,834	+				-1.8
1,750,916	+				+0.5
1,752,315	+				+0.0
1,752,316	-				+1.0
1,752,613	+		PS417_08010	0.30	+0.7
1,752,694	+		PS417_08010	0.36	-1.6
1,752,729	+		PS417_08010	0.39	+0.7
1,752,730	-		PS417_08010	0.39	-1.5
1,752,730	-		PS417_08010	0.39	+0.2
1,752,799	+		PS417_08010	0.45	-0.7
1,752,874	+		PS417_08010	0.51	-0.8
1,752,874	+		PS417_08010	0.51	-0.4
1,752,874	+		PS417_08010	0.51	+0.3
1,752,874	+		PS417_08010	0.51	-0.5
1,752,874	+		PS417_08010	0.51	+1.7
1,752,875	-		PS417_08010	0.51	-0.7
1,752,875	-		PS417_08010	0.51	-0.4
1,752,875	-		PS417_08010	0.51	-0.4
1,752,875	-		PS417_08010	0.51	-0.1
1,752,878	+		PS417_08010	0.51	-0.1
1,752,878	+		PS417_08010	0.51	+0.5
1,752,878	+		PS417_08010	0.51	-0.5
1,752,878	+		PS417_08010	0.51	-0.1
1,752,878	+		PS417_08010	0.51	-0.7
1,752,878	+		PS417_08010	0.51	+0.1
1,752,878	+		PS417_08010	0.51	+0.5
1,752,878	+		PS417_08010	0.51	-0.8
1,752,879	-		PS417_08010	0.51	-0.1
1,752,879	-		PS417_08010	0.51	+0.5
1,752,879	-		PS417_08010	0.51	+0.7
1,752,916	+		PS417_08010	0.54	+0.1
1,752,916	+		PS417_08010	0.54	-1.1
1,752,916	+		PS417_08010	0.54	-0.9
1,752,916	+		PS417_08010	0.54	-0.3
1,752,916	+		PS417_08010	0.54	+0.7
1,752,916	+		PS417_08010	0.54	-0.8
1,752,916	+		PS417_08010	0.54	+0.7
1,752,916	+		PS417_08010	0.54	-0.2
1,752,917	-		PS417_08010	0.54	+0.2
1,752,917	-		PS417_08010	0.54	+0.3
1,752,917	-		PS417_08010	0.54	+0.3
1,752,917	-		PS417_08010	0.54	+0.8
1,752,917	-		PS417_08010	0.54	-0.0
1,752,917	-		PS417_08010	0.54	+1.2
1,752,917	-		PS417_08010	0.54	-0.7