Strain Fitness in Pseudomonas simiae WCS417 around PS417_07765

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,706,900	+		PS417_07755	0.68	-0.1
1,706,900	+		PS417_07755	0.68	+0.1
1,706,900	+		PS417_07755	0.68	+0.3
1,706,919	+		PS417_07755	0.70	+0.4
1,706,919	+		PS417_07755	0.70	-1.6
1,706,919	+		PS417_07755	0.70	+0.8
1,706,919	+		PS417_07755	0.70	+1.4
1,706,919	+		PS417_07755	0.70	+0.5
1,706,919	+		PS417_07755	0.70	+0.7
1,706,920	-		PS417_07755	0.70	+0.9
1,706,920	-		PS417_07755	0.70	+0.5
1,706,920	-		PS417_07755	0.70	-1.3
1,706,920	-		PS417_07755	0.70	+0.7
1,706,923	+		PS417_07755	0.71	+0.4
1,706,923	+		PS417_07755	0.71	-0.1
1,706,923	+		PS417_07755	0.71	+1.7
1,706,924	-		PS417_07755	0.71	+0.9
1,707,043	-		PS417_07755	0.83	+0.1
1,707,043	-		PS417_07755	0.83	+1.5
1,707,184	+				+1.7
1,707,184	+				+1.1
1,707,190	+				+0.1
1,707,191	-				+1.7
1,707,191	-				+1.1
1,707,191	-				-1.8
1,707,191	-				+1.4
1,707,232	-				+0.1
1,707,241	-				+3.7
1,707,243	+				+0.7
1,707,243	+				-2.8
1,707,421	+		PS417_07760	0.29	+0.7
1,707,421	+		PS417_07760	0.29	-2.8
1,707,422	-		PS417_07760	0.29	+0.1
1,707,422	-		PS417_07760	0.29	-0.9
1,707,453	-		PS417_07760	0.35	-0.1
1,707,545	+		PS417_07760	0.52	-0.2
1,707,545	+		PS417_07760	0.52	+0.2
1,707,546	-		PS417_07760	0.52	-0.3
1,707,546	-		PS417_07760	0.52	-3.3
1,707,623	+		PS417_07760	0.67	-0.0
1,707,686	-		PS417_07760	0.79	+1.3
1,707,689	+		PS417_07760	0.79	+0.9
1,707,690	-		PS417_07760	0.79	+0.5
1,707,866	+				+0.8
1,707,866	+				+0.2
1,707,915	-		PS417_07765	0.21	+0.0
1,707,917	+		PS417_07765	0.22	-0.5
1,707,968	+		PS417_07765	0.45	+0.4
1,707,968	+		PS417_07765	0.45	+0.4
1,708,057	+		PS417_07765	0.85	-1.0
1,708,080	-				+0.9
1,708,080	-				-1.8
1,708,136	-				-0.5
1,708,173	-				+0.6
1,708,181	-				+0.8
1,708,190	-				+1.4
1,708,374	+				+0.3
1,708,416	-				-1.6
1,708,524	+				+2.7
1,708,790	-		PS417_07770	0.58	+0.2
1,708,898	+				-1.1
1,708,898	+				+0.1
1,708,899	-				-1.8
1,708,903	-				+0.7
1,708,903	-				+0.6
1,708,911	+				+0.1
1,708,913	+				-2.0