Strain Fitness in Pseudomonas simiae WCS417 around PS417_06885

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,524,171	-		PS417_06880	0.88	+1.9
1,524,171	-		PS417_06880	0.88	+1.1
1,524,177	+		PS417_06880	0.89	-0.1
1,524,177	+		PS417_06880	0.89	-0.1
1,524,177	+		PS417_06880	0.89	-1.2
1,524,177	+		PS417_06880	0.89	-1.1
1,524,184	-				-1.2
1,524,185	+				+0.7
1,524,185	+				-1.1
1,524,185	+				-0.2
1,524,185	+				-0.3
1,524,185	+				-0.3
1,524,185	+				+0.1
1,524,186	-				-1.4
1,524,646	+				-0.3
1,524,646	+		PS417_06885	0.24	-1.9
1,524,646	+		PS417_06885	0.24	-0.4
1,524,646	+		PS417_06885	0.24	-0.6
1,524,647	-		PS417_06885	0.24	-1.0
1,524,647	-		PS417_06885	0.24	-0.9
1,524,648	+		PS417_06885	0.24	-1.6
1,524,749	-		PS417_06885	0.36	+0.6
1,524,749	-		PS417_06885	0.36	-2.1
1,524,899	-		PS417_06885	0.53	-0.6
1,525,148	-		PS417_06885	0.81	+0.1
1,525,276	+				-1.6
1,525,277	-				-1.4
1,525,383	-				-0.7
1,525,385	+				+0.4
1,525,385	+				-0.3
1,525,386	-				+0.7
1,525,386	-				+3.1
1,525,386	-				+0.3
1,525,386	-				+3.4
1,525,682	+		PS417_06890	0.44	-0.1
1,525,683	-		PS417_06890	0.44	+0.6
1,525,701	+		PS417_06890	0.46	-3.0
1,525,925	+		PS417_06890	0.75	+2.5
1,525,926	-		PS417_06890	0.75	-0.2
1,525,928	+		PS417_06890	0.75	+0.1
1,525,929	-		PS417_06890	0.75	+0.6
1,525,929	-		PS417_06890	0.75	+0.2
1,526,040	+		PS417_06890	0.90	-2.7
1,526,040	+		PS417_06890	0.90	-2.0
1,526,041	-		PS417_06890	0.90	-1.7
1,526,041	-				+1.7
1,526,108	-				+0.2
1,526,268	+				-1.0