Strain Fitness in Pseudomonas simiae WCS417 around PS417_06875

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,521,794	-		PS417_06870	0.68	+1.3
1,522,045	-		PS417_06870	0.78	+0.1
1,522,303	+		PS417_06870	0.88	+0.4
1,522,303	+		PS417_06870	0.88	-1.1
1,522,304	-		PS417_06870	0.88	+0.6
1,522,304	-		PS417_06870	0.88	+0.9
1,522,304	-		PS417_06870	0.88	-0.4
1,522,534	-				+0.4
1,522,534	-				+0.3
1,522,544	+				+1.1
1,522,638	+				+2.8
1,522,638	+				+1.0
1,522,638	+				-0.4
1,522,638	+				+0.4
1,522,639	-				-3.0
1,522,643	-				-1.1
1,522,752	-				+0.3
1,523,301	+		PS417_06875	0.59	-1.9
1,523,302	-		PS417_06875	0.59	-2.0
1,523,302	-		PS417_06875	0.59	-0.6
1,523,302	-		PS417_06875	0.59	+1.1
1,523,370	+		PS417_06875	0.66	-0.5
1,523,371	-		PS417_06875	0.66	-1.2
1,523,371	-		PS417_06875	0.66	-1.3
1,524,171	-		PS417_06880	0.88	+1.9
1,524,171	-		PS417_06880	0.88	+1.1
1,524,177	+		PS417_06880	0.89	-0.1
1,524,177	+		PS417_06880	0.89	-0.1
1,524,177	+		PS417_06880	0.89	-1.2
1,524,177	+		PS417_06880	0.89	-1.1
1,524,184	-				-1.2
1,524,185	+				+0.7
1,524,185	+				-1.1
1,524,185	+				-0.2
1,524,185	+				-0.3
1,524,185	+				-0.3
1,524,185	+				+0.1
1,524,186	-				-1.4
1,524,646	+				-0.3
1,524,646	+		PS417_06885	0.24	-1.9
1,524,646	+		PS417_06885	0.24	-0.4
1,524,646	+		PS417_06885	0.24	-0.6
1,524,647	-		PS417_06885	0.24	-1.0
1,524,647	-		PS417_06885	0.24	-0.9
1,524,648	+		PS417_06885	0.24	-1.6