Strain Fitness in Pseudomonas simiae WCS417 around PS417_06810

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,507,075	+		PS417_06800	0.86	+0.3
1,507,075	+		PS417_06800	0.86	-0.3
1,507,075	+		PS417_06800	0.86	-0.2
1,507,076	-		PS417_06800	0.86	+0.1
1,507,156	+				-0.0
1,507,157	-				-0.8
1,507,157	-				-0.7
1,507,200	+				-0.8
1,507,200	+				-0.5
1,507,201	-				+1.7
1,507,201	-				-0.5
1,507,201	-				-0.6
1,507,201	-				+0.7
1,507,267	-				+1.0
1,507,436	+		PS417_06805	0.22	+0.1
1,507,475	-				+1.0
1,507,538	+		PS417_06805	0.34	-0.4
1,507,538	+		PS417_06805	0.34	-1.5
1,507,539	-		PS417_06805	0.35	-0.3
1,507,539	-		PS417_06805	0.35	-0.3
1,507,979	+				-2.4
1,507,980	-				-0.4
1,507,980	-				+0.1
1,508,013	-				-0.1
1,508,013	-				+0.6
1,508,085	-				+0.8
1,508,096	-				-1.1
1,508,096	-				+0.7
1,508,189	+		PS417_06810	0.18	+0.5
1,508,189	+		PS417_06810	0.18	+0.7
1,508,190	-		PS417_06810	0.18	-1.0
1,508,190	-		PS417_06810	0.18	+0.0
1,508,292	-		PS417_06810	0.31	+0.6
1,508,372	+		PS417_06810	0.42	+4.7
1,508,373	-		PS417_06810	0.42	-0.2
1,508,373	-		PS417_06810	0.42	-1.6
1,508,639	+		PS417_06810	0.77	-0.5
1,508,639	+				-0.9
1,508,640	-		PS417_06810	0.77	+1.0
1,508,903	+				-0.1
1,508,904	-				+0.4
1,509,211	+		PS417_06815	0.20	-1.1
1,509,212	-		PS417_06815	0.20	+0.3
1,509,431	-		PS417_06815	0.40	+1.6
1,509,607	-		PS417_06815	0.57	+0.1
1,509,613	+		PS417_06815	0.57	-0.7
1,509,613	+		PS417_06815	0.57	+2.2
1,509,613	+		PS417_06815	0.57	+1.8
1,509,614	-		PS417_06815	0.57	-2.4
1,509,614	-		PS417_06815	0.57	-0.3
1,509,614	-		PS417_06815	0.57	+0.6
1,509,615	+		PS417_06815	0.57	-0.4
1,509,615	+		PS417_06815	0.57	-2.3
1,509,615	+		PS417_06815	0.57	-0.2
1,509,615	+		PS417_06815	0.57	-2.2
1,509,616	-		PS417_06815	0.58	-1.3
1,509,616	-		PS417_06815	0.58	-0.4
1,509,616	-		PS417_06815	0.58	-0.1
1,509,616	-		PS417_06815	0.58	+1.4
1,509,616	-		PS417_06815	0.58	-0.0
1,509,616	-		PS417_06815	0.58	+0.3
1,509,616	-		PS417_06815	0.58	-0.1
1,509,715	+		PS417_06815	0.67	-0.1