Strain Fitness in Pseudomonas simiae WCS417 around PS417_06425

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,423,182	+		PS417_06420	0.40	+0.8
1,423,183	-		PS417_06420	0.40	-1.1
1,423,530	+		PS417_06420	0.62	-1.3
1,423,591	-		PS417_06420	0.65	+0.2
1,423,617	-		PS417_06420	0.67	+0.2
1,423,617	-		PS417_06420	0.67	-0.4
1,423,654	+		PS417_06420	0.69	-0.4
1,423,875	+		PS417_06420	0.83	+0.3
1,423,875	+		PS417_06420	0.83	+1.4
1,423,879	+		PS417_06420	0.83	+1.0
1,423,880	-		PS417_06420	0.83	+0.2
1,423,933	-				+0.1
1,424,038	-				-0.7
1,424,038	-				-0.4
1,424,079	+				-0.6
1,424,127	-				-1.1
1,424,137	-				-0.0
1,424,186	+				+1.4
1,424,186	+				+0.6
1,424,411	+		PS417_06425	0.25	+0.2
1,424,514	-		PS417_06425	0.36	+0.2
1,424,515	+		PS417_06425	0.36	+0.1
1,424,515	+		PS417_06425	0.36	+0.8
1,424,516	-		PS417_06425	0.36	+0.7
1,424,531	+		PS417_06425	0.37	+0.4
1,424,531	+		PS417_06425	0.37	+3.0
1,424,531	+				+1.1
1,424,531	+		PS417_06425	0.37	+2.6
1,424,531	+		PS417_06425	0.37	-2.4
1,424,531	+		PS417_06425	0.37	-2.0
1,424,531	+		PS417_06425	0.37	-1.6
1,424,531	+		PS417_06425	0.37	+0.4
1,424,531	+		PS417_06425	0.37	-1.0
1,424,532	-		PS417_06425	0.38	+0.2
1,424,532	-		PS417_06425	0.38	+0.6
1,424,532	-		PS417_06425	0.38	-0.1
1,424,532	-		PS417_06425	0.38	-0.1
1,424,532	-		PS417_06425	0.38	+0.9
1,424,549	+		PS417_06425	0.39	+1.1
1,424,738	+		PS417_06425	0.58	-0.1
1,424,738	+		PS417_06425	0.58	-1.2
1,424,739	-		PS417_06425	0.58	-1.5
1,424,739	-		PS417_06425	0.58	-0.9
1,424,769	+		PS417_06425	0.61	+0.2
1,424,770	-		PS417_06425	0.61	+1.3
1,424,829	-		PS417_06425	0.67	+0.6
1,424,890	+		PS417_06425	0.73	+1.1
1,425,024	-		PS417_06425	0.86	+0.6
1,425,104	+				-0.3
1,425,190	+				-0.3
1,425,190	+				+0.3
1,425,191	-				+0.7
1,425,226	-				+0.3
1,425,226	-				-0.3
1,425,226	-				+0.0
1,425,273	+				+0.9
1,425,273	+				-0.3
1,425,273	+				+0.4
1,425,274	-				+0.2
1,425,274	-				-0.5
1,425,274	-				-0.4
1,425,319	+				-0.1
1,425,361	+				+1.1
1,425,361	+				-0.6
1,425,362	-				-1.4
1,425,793	+		PS417_06430	0.21	-1.1