Strain Fitness in Pseudomonas simiae WCS417 around PS417_00595

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
118,469	+				+1.1
118,470	-				-0.5
118,492	+				-1.0
118,493	-				+0.2
118,493	-				-0.3
118,541	+				+1.4
118,559	+				-0.2
118,559	+				+0.6
118,560	-				+0.3
118,560	-				+0.1
118,560	-				+0.4
118,560	-				-0.0
118,561	+				+0.4
118,561	+				+1.9
118,563	+				+0.1
118,563	+				-0.4
118,563	+				-1.3
118,564	-				+0.7
118,564	-				+0.4
118,564	-				+1.0
118,564	-				+0.2
118,564	-				-0.1
118,564	-				+0.9
118,564	-				-2.0
118,613	-				+0.4
118,662	-				+0.3
118,662	-				-0.3
118,972	-		PS417_00590	0.10	-0.7
118,972	-		PS417_00590	0.10	+1.0
119,126	-				-0.2
119,133	+				+0.2
119,134	-				-2.1
119,193	-				+0.6
119,193	-				+2.1
119,205	+				-0.2
119,206	-				-3.0
119,206	-				+0.1
119,295	+				+1.0
119,295	+				-0.0
119,296	-				+0.3
119,296	-				-0.6
119,298	-				+1.1
119,303	+				-0.3
119,303	+				-1.0
119,303	+				-1.2
119,304	-				-2.2
119,304	-				+0.0
119,368	+				-0.5
119,439	-				-1.1
119,439	-				-1.8
119,439	-				-0.1
119,439	-				-0.7
119,447	+				+0.0
119,448	-				-0.1
119,547	+				-3.0
119,578	-		PS417_00595	0.12	+1.8
119,654	+		PS417_00595	0.16	+1.0
119,654	+		PS417_00595	0.16	-0.3
119,654	+		PS417_00595	0.16	+0.9
119,655	-		PS417_00595	0.16	-0.6
119,739	-		PS417_00595	0.20	-0.0
119,739	-		PS417_00595	0.20	-1.5
119,783	+		PS417_00595	0.22	-0.1
119,784	-		PS417_00595	0.23	-0.5
119,784	-		PS417_00595	0.23	+1.0
119,784	-		PS417_00595	0.23	-0.2
119,784	-		PS417_00595	0.23	+0.4
119,797	-		PS417_00595	0.23	-0.4
120,008	+		PS417_00595	0.34	+1.9
120,008	+		PS417_00595	0.34	+3.6
120,009	-		PS417_00595	0.35	-0.7
120,009	-		PS417_00595	0.35	+1.3
120,085	+				+2.4
120,102	+		PS417_00595	0.39	+0.9
120,119	+		PS417_00595	0.40	+0.2
120,119	+		PS417_00595	0.40	-0.9
120,119	+		PS417_00595	0.40	-0.6
120,120	-		PS417_00595	0.40	-1.8
120,120	-		PS417_00595	0.40	+0.6
120,120	-		PS417_00595	0.40	-0.3
120,153	-		PS417_00595	0.42	-0.3
120,176	-		PS417_00595	0.43	-1.7
120,208	-		PS417_00595	0.45	+1.2
120,313	-		PS417_00595	0.51	+0.1
120,382	-		PS417_00595	0.54	+0.3
120,382	-		PS417_00595	0.54	-0.1
120,388	+		PS417_00595	0.55	+0.7
120,389	-		PS417_00595	0.55	-0.7
120,453	+		PS417_00595	0.58	+0.5
120,454	-		PS417_00595	0.58	+0.5
120,475	+		PS417_00595	0.59	+0.7
120,476	-		PS417_00595	0.59	-2.4
120,566	-		PS417_00595	0.64	+1.8
121,470	+		PS417_00600	0.40	+0.1
121,471	-		PS417_00600	0.40	+4.1
121,471	-		PS417_00600	0.40	-0.4
121,471	-		PS417_00600	0.40	-2.4
121,538	-		PS417_00600	0.55	+1.4
121,538	-		PS417_00600	0.55	+1.2
121,594	+				+1.8
121,595	-		PS417_00600	0.67	+0.5
121,643	+		PS417_00600	0.78	+2.0
121,643	+		PS417_00600	0.78	-0.9
121,643	+		PS417_00600	0.78	-0.8
121,643	+		PS417_00600	0.78	+0.0
121,643	+		PS417_00600	0.78	+0.4
121,644	-		PS417_00600	0.78	-0.7
121,644	-		PS417_00600	0.78	-0.0
121,644	-		PS417_00600	0.78	+0.1
121,691	+		PS417_00600	0.88	+1.7
121,723	+				-1.7
121,744	+				-0.4
121,744	+				+3.5
121,745	-				-1.2
121,788	+				+1.1
121,967	+				-1.8
121,968	-				-0.2
122,038	-				+0.0