Strain Fitness in Pseudomonas simiae WCS417 around PS417_05465

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,230,782	+				+0.1
1,230,783	-		PS417_05460	0.87	-1.3
1,230,884	+		PS417_05460	0.89	+0.3
1,230,884	+		PS417_05460	0.89	+0.5
1,230,885	-		PS417_05460	0.89	-0.5
1,231,016	+				+3.0
1,231,135	+				+0.5
1,231,614	+				+1.9
1,231,614	+				+0.4
1,231,614	+				+0.2
1,231,618	+				-0.4
1,231,618	+				+2.8
1,231,618	+				-1.0
1,231,618	+				-1.5
1,231,618	+				-1.1
1,231,618	+				-2.0
1,231,618	+				-0.9
1,231,619	-				-1.5
1,231,619	-				+0.6
1,231,619	-				+0.3
1,231,619	-				-1.1
1,231,619	-				+2.9
1,231,619	-				-1.9
1,231,708	+				-0.1
1,231,708	+				-0.0
1,231,749	+				-0.6
1,231,749	+				+0.7
1,231,753	+				-1.4
1,231,918	+		PS417_05465	0.18	-1.7
1,231,918	+		PS417_05465	0.18	-0.3
1,231,919	-		PS417_05465	0.18	+2.4
1,231,996	+		PS417_05465	0.25	-1.3
1,231,996	+		PS417_05465	0.25	+1.1
1,231,997	-		PS417_05465	0.25	-0.2
1,231,997	-		PS417_05465	0.25	+0.2
1,231,997	-		PS417_05465	0.25	+0.3
1,232,058	+		PS417_05465	0.31	-1.7
1,232,088	+		PS417_05465	0.34	+0.1
1,232,159	-		PS417_05465	0.41	+1.8
1,232,591	+		PS417_05465	0.84	+1.3
1,232,682	+				+0.4
1,232,765	+				-2.0
1,232,765	+				+1.7
1,232,766	-				-0.6
1,232,766	-				-1.2
1,233,109	+		PS417_05470	0.45	+0.4
1,233,110	-		PS417_05470	0.46	-0.9
1,233,110	-		PS417_05470	0.46	+2.1
1,233,166	+		PS417_05470	0.54	-0.7
1,233,166	+		PS417_05470	0.54	+0.2
1,233,167	-		PS417_05470	0.54	-0.9
1,233,167	-		PS417_05470	0.54	-3.2
1,233,305	-		PS417_05470	0.75	-0.7
1,233,553	+				+2.8