Strain Fitness in Pseudomonas simiae WCS417 around PS417_04800

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,062,196	+				+0.6
1,062,196	+				+0.2
1,062,197	-				-0.0
1,062,263	+				+0.3
1,062,264	-				-1.0
1,062,332	+		PS417_04795	0.20	+0.3
1,062,333	-		PS417_04795	0.20	+0.5
1,062,333	-		PS417_04795	0.20	-2.7
1,062,545	+		PS417_04795	0.53	-0.2
1,062,545	+		PS417_04795	0.53	-0.4
1,062,545	+		PS417_04795	0.53	+0.6
1,062,545	+		PS417_04795	0.53	+0.0
1,062,546	-		PS417_04795	0.53	+0.1
1,062,546	-		PS417_04795	0.53	+0.7
1,062,602	+		PS417_04795	0.61	-1.0
1,062,707	+		PS417_04795	0.77	-1.2
1,062,708	-		PS417_04795	0.77	+0.0
1,062,708	-		PS417_04795	0.77	+2.3
1,062,843	+				+0.4
1,062,862	+				-0.0
1,063,018	-				-0.4
1,063,194	+		PS417_04800	0.27	+0.8
1,063,387	+		PS417_04800	0.43	+1.8
1,063,388	-		PS417_04800	0.44	+1.9
1,063,846	-		PS417_04800	0.82	+0.9
1,064,031	+				+1.3
1,064,031	+				-0.2
1,064,031	+				-0.1
1,064,032	-				+1.3
1,064,082	-				-2.6
1,064,186	+				-0.4
1,064,448	-		PS417_04805	0.25	+0.7
1,064,448	-		PS417_04805	0.25	+0.1
1,064,448	-		PS417_04805	0.25	-0.4
1,064,451	+		PS417_04805	0.25	+1.6
1,064,618	+		PS417_04805	0.36	-1.0
1,064,619	-		PS417_04805	0.36	+0.3
1,064,619	-		PS417_04805	0.36	+2.3
1,064,720	+		PS417_04805	0.43	+0.0
1,064,721	-		PS417_04805	0.43	-1.0
1,064,721	-		PS417_04805	0.43	-0.3
1,064,721	-		PS417_04805	0.43	-0.0
1,064,721	-		PS417_04805	0.43	-0.8
1,064,721	-		PS417_04805	0.43	+1.0
1,064,721	-		PS417_04805	0.43	+0.5
1,064,726	+		PS417_04805	0.43	-0.8
1,064,727	-		PS417_04805	0.43	-0.2
1,064,795	+		PS417_04805	0.47	+0.6
1,064,795	+		PS417_04805	0.47	+0.3
1,064,796	-		PS417_04805	0.47	-0.6
1,064,883	-				+0.6
1,064,883	-		PS417_04805	0.53	+0.4
1,064,897	+		PS417_04805	0.54	-0.9
1,064,897	+				+0.6