Strain Fitness in Pseudomonas simiae WCS417 around PS417_04715

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,045,640	+				-0.7
1,045,688	+				+0.9
1,045,689	-				-0.7
1,045,800	+				+0.5
1,045,800	+				+0.9
1,045,801	-				-0.0
1,045,801	-				+0.9
1,045,813	-				+1.3
1,045,813	-				+0.8
1,045,949	-		PS417_04710	0.21	+0.2
1,045,993	+		PS417_04710	0.26	-1.1
1,045,994	-		PS417_04710	0.26	+1.1
1,045,994	-		PS417_04710	0.26	-0.0
1,046,065	+		PS417_04710	0.36	+0.1
1,046,206	-		PS417_04710	0.54	-1.3
1,046,319	+		PS417_04710	0.69	+0.2
1,046,387	+		PS417_04710	0.77	-0.7
1,046,387	+		PS417_04710	0.77	+0.1
1,046,388	-		PS417_04710	0.78	-0.6
1,046,413	+		PS417_04710	0.81	-0.6
1,046,453	-		PS417_04710	0.86	-1.4
1,046,503	+				+0.5
1,046,503	+				+1.1
1,046,566	+				+0.6
1,046,566	+				+0.9
1,046,633	-				-0.4
1,046,633	-				-0.5
1,046,742	+		PS417_04715	0.19	+0.4
1,046,743	-		PS417_04715	0.19	+2.0
1,046,835	+		PS417_04715	0.31	-0.4
1,046,922	+		PS417_04715	0.43	+1.6
1,046,922	+		PS417_04715	0.43	-0.4
1,046,923	-		PS417_04715	0.43	+2.1
1,046,923	-		PS417_04715	0.43	+0.0
1,046,923	-		PS417_04715	0.43	-1.5
1,047,026	-		PS417_04715	0.57	-0.2
1,047,055	+				-1.8
1,047,367	+				-2.5
1,047,367	+				-1.8
1,047,367	+				+0.1
1,047,368	-				-0.9
1,047,368	-				-1.5
1,047,440	-				-1.6
1,047,467	+				+0.2
1,047,468	-				-0.3
1,047,468	-				+0.2
1,047,470	+				-0.3
1,047,470	+				-0.4
1,047,470	+				+0.2
1,047,471	-				+0.8
1,047,471	-				-0.3
1,047,471	-				-0.3
1,047,471	-				-0.2
1,047,507	+		PS417_04720	0.11	-1.4
1,047,508	-		PS417_04720	0.11	-3.1
1,047,982	-				-0.0
1,048,085	+		PS417_04725	0.17	-2.1
1,048,085	+		PS417_04725	0.17	+0.4
1,048,085	+		PS417_04725	0.17	-0.3
1,048,086	-		PS417_04725	0.17	+0.3