Strain Fitness in Pseudomonas simiae WCS417 around PS417_28235

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
6,094,795	+		PS417_28230	0.19	-0.3
6,094,795	+				+2.2
6,094,796	-		PS417_28230	0.19	-0.7
6,094,796	-		PS417_28230	0.19	+0.3
6,095,095	+		PS417_28230	0.54	-1.2
6,095,096	-		PS417_28230	0.54	+2.6
6,095,215	+		PS417_28230	0.68	-0.4
6,095,216	-		PS417_28230	0.68	-0.0
6,095,477	+				+0.6
6,095,478	-				+0.3
6,095,533	-				+2.6
6,095,631	+				+1.0
6,095,631	+				-1.0
6,095,727	+				-0.3
6,095,728	-				-0.2
6,095,907	+				+0.0
6,095,931	+				-0.0
6,096,066	+		PS417_28235	0.14	-0.8
6,096,067	-		PS417_28235	0.14	-1.1
6,096,272	-		PS417_28235	0.21	-0.2
6,096,372	+		PS417_28235	0.25	-0.5
6,096,372	+		PS417_28235	0.25	-0.7
6,096,428	+		PS417_28235	0.27	-0.5
6,096,428	+		PS417_28235	0.27	+0.1
6,096,429	-		PS417_28235	0.27	-1.4
6,096,503	+		PS417_28235	0.29	-0.7
6,096,741	-		PS417_28235	0.38	+0.6
6,096,741	-		PS417_28235	0.38	-1.0
6,097,263	+		PS417_28235	0.56	+0.1
6,097,356	-		PS417_28235	0.59	-1.4
6,097,585	-		PS417_28235	0.67	-1.2
6,098,025	+		PS417_28235	0.82	-0.1
6,098,026	-		PS417_28235	0.82	-0.7
6,098,089	-		PS417_28235	0.85	-0.4
6,098,228	-		PS417_28235	0.89	-0.4
6,098,228	-		PS417_28235	0.89	+0.3
6,098,347	-				-0.0
6,098,347	-				+0.6
6,098,347	-				-1.9
6,098,428	-				+0.4
6,098,531	-				+0.0
6,098,543	+				-1.7
6,098,543	+				+0.1
6,098,543	+				-1.1
6,098,544	-				+1.0
6,098,544	-				-0.3
6,098,544	-				-1.8
6,098,544	-				-0.8
6,098,544	-				-0.5
6,098,544	-				+3.0
6,098,544	-				+0.6
6,098,544	-				+0.2
6,098,545	+				-1.3
6,098,545	+				-1.7
6,098,575	+				+0.6
6,098,607	-				+0.3
6,098,607	-				-1.6
6,098,607	-				+0.6
6,098,607	-				+0.7
6,098,607	-				-1.3
6,098,607	-				-0.0
6,098,767	-				+0.7
6,098,767	-				-2.6
6,099,150	+				+4.4
6,099,151	-				-2.4
6,099,151	-				-0.5
6,099,523	+				-1.0
6,099,524	-				-0.8
6,099,524	-				-0.7
6,099,524	-				-1.4