Strain Fitness in Pseudomonas simiae WCS417 around PS417_27560

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,943,829	+				-1.0
5,943,830	-				-0.9
5,943,830	-				+1.3
5,943,832	+				-2.2
5,943,833	-				+0.5
5,943,833	-				-1.3
5,943,833	-				-2.7
5,943,837	-				-0.4
5,943,837	-				-0.4
5,943,909	-				-1.8
5,943,910	+				-1.2
5,943,910	+				+0.1
5,943,910	+				-0.7
5,943,911	-				+0.7
5,943,911	-				-2.6
5,943,911	-				+0.4
5,944,274	+				-0.1
5,944,346	+				-0.6
5,944,355	-				-1.1
5,944,372	+				+0.6
5,944,372	+				+0.6
5,944,372	+				+1.3
5,944,372	+				+0.0
5,944,373	-				+3.3
5,944,373	-				-1.4
5,944,373	-				-2.2
5,944,373	-				-0.2
5,944,379	+				-1.6
5,944,379	+				-0.2
5,944,379	+				+2.2
5,944,379	+				-0.5
5,944,380	-				-1.2
5,944,380	-				+1.7
5,944,416	+		PS417_27555	0.17	+1.7
5,944,416	+		PS417_27555	0.17	+1.9
5,944,416	+		PS417_27555	0.17	+2.6
5,944,417	-		PS417_27555	0.17	-1.2
5,944,417	-		PS417_27555	0.17	+0.9
5,944,417	-		PS417_27555	0.17	-0.4
5,944,731	-				+0.5
5,944,994	+				+0.0
5,944,995	-				-0.7
5,944,995	-				-2.5
5,944,995	-				-1.6
5,945,087	+		PS417_27560	0.10	+1.2
5,945,378	+		PS417_27560	0.20	-0.8
5,945,379	-		PS417_27560	0.21	-1.0
5,945,456	+		PS417_27560	0.23	-0.1
5,945,456	+		PS417_27560	0.23	+0.6
5,945,457	-		PS417_27560	0.23	-0.4
5,945,471	+		PS417_27560	0.24	-0.0
5,945,652	-		PS417_27560	0.30	-0.5
5,945,652	-		PS417_27560	0.30	+1.3
5,945,744	+		PS417_27560	0.33	-1.4
5,945,744	+		PS417_27560	0.33	+1.5
5,945,745	-		PS417_27560	0.33	-0.3
5,945,745	-		PS417_27560	0.33	-0.2
5,945,756	+		PS417_27560	0.34	-1.7
5,945,774	+		PS417_27560	0.34	-1.6
5,945,775	-		PS417_27560	0.34	-1.9
5,945,829	-		PS417_27560	0.36	-0.5
5,945,968	-		PS417_27560	0.41	-0.8
5,946,014	+		PS417_27560	0.43	+0.9
5,946,014	+		PS417_27560	0.43	+3.3
5,946,014	+		PS417_27560	0.43	+0.8
5,946,015	-		PS417_27560	0.43	+3.1
5,946,015	-		PS417_27560	0.43	+0.9
5,946,091	-		PS417_27560	0.46	-0.3
5,946,091	-		PS417_27560	0.46	-1.9
5,946,243	-		PS417_27560	0.51	-1.0
5,946,243	-		PS417_27560	0.51	+2.4
5,946,243	-		PS417_27560	0.51	+1.0
5,946,426	+		PS417_27560	0.57	+1.3
5,946,426	+		PS417_27560	0.57	+0.1
5,946,427	-		PS417_27560	0.57	+0.5
5,946,556	+		PS417_27560	0.62	+3.0
5,946,714	-		PS417_27560	0.68	+1.0
5,946,858	-		PS417_27560	0.73	-2.2
5,946,921	+		PS417_27560	0.75	+2.2
5,946,922	-		PS417_27560	0.75	+0.6
5,946,922	-				-1.6
5,946,954	-		PS417_27560	0.76	-0.2
5,947,100	+		PS417_27560	0.81	-0.3
5,947,100	+		PS417_27560	0.81	-1.2
5,947,100	+		PS417_27560	0.81	-1.4
5,947,100	+		PS417_27560	0.81	-1.4
5,947,100	+		PS417_27560	0.81	+1.4
5,947,100	+		PS417_27560	0.81	+3.1
5,947,101	-		PS417_27560	0.81	+0.3
5,947,101	-		PS417_27560	0.81	-0.6
5,947,101	-		PS417_27560	0.81	+1.6
5,947,101	-		PS417_27560	0.81	+0.5
5,947,101	-		PS417_27560	0.81	-0.6
5,947,101	-		PS417_27560	0.81	-0.5
5,947,265	+		PS417_27560	0.87	-1.9
5,947,265	+		PS417_27560	0.87	-2.3
5,947,265	+		PS417_27560	0.87	+0.9
5,947,265	+		PS417_27560	0.87	+0.0
5,947,265	+		PS417_27560	0.87	-0.4
5,947,265	+		PS417_27560	0.87	+1.1
5,947,266	-		PS417_27560	0.87	+0.8
5,947,266	-		PS417_27560	0.87	-1.9
5,947,266	-		PS417_27560	0.87	-1.5
5,947,275	+		PS417_27560	0.87	-0.5
5,947,275	+		PS417_27560	0.87	+0.0
5,947,275	+		PS417_27560	0.87	-1.0
5,947,276	-		PS417_27560	0.87	-0.1
5,947,352	+		PS417_27560	0.90	+0.6
5,947,352	+		PS417_27560	0.90	+0.7
5,947,395	+				-1.1
5,947,395	+				+1.3
5,947,399	+				+0.2
5,947,400	-				+0.4
5,947,400	-				-1.7
5,947,400	-				+0.1
5,947,409	+				-0.2
5,947,522	-				+1.6
5,947,578	-				-0.1
5,947,578	-				-0.1
5,948,321	+				+0.5
5,948,322	-				+0.7
5,948,352	-				+0.5