Strain Fitness in Pseudomonas simiae WCS417 around PS417_23635

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,110,581	+				-3.0
5,110,581	+				-0.2
5,110,582	-				+0.4
5,110,636	+				+1.6
5,110,636	+				+0.3
5,110,783	+		PS417_23630	0.25	+0.0
5,110,783	+		PS417_23630	0.25	+2.7
5,110,783	+		PS417_23630	0.25	-1.4
5,110,870	+		PS417_23630	0.40	+2.6
5,110,870	+		PS417_23630	0.40	-1.0
5,110,870	+		PS417_23630	0.40	+0.1
5,110,870	+		PS417_23630	0.40	+0.9
5,110,870	+		PS417_23630	0.40	-0.5
5,110,871	-		PS417_23630	0.40	-0.3
5,110,871	-		PS417_23630	0.40	-0.2
5,110,903	+		PS417_23630	0.45	+1.0
5,110,903	+		PS417_23630	0.45	-1.2
5,110,984	+		PS417_23630	0.59	+0.5
5,111,032	+		PS417_23630	0.67	-0.3
5,111,032	+		PS417_23630	0.67	-1.4
5,111,033	-		PS417_23630	0.67	+0.7
5,111,083	+		PS417_23630	0.76	+0.5
5,111,167	+				+0.4
5,111,309	+				-1.4
5,111,715	+		PS417_23635	0.48	-0.1
5,111,716	-		PS417_23635	0.48	-0.5
5,111,716	-		PS417_23635	0.48	-1.1
5,111,752	+		PS417_23635	0.53	-1.2
5,111,752	+		PS417_23635	0.53	+0.1
5,111,753	-		PS417_23635	0.53	-1.1
5,111,804	+		PS417_23635	0.60	-1.7
5,111,966	+		PS417_23635	0.81	-0.1
5,111,966	+		PS417_23635	0.81	-2.0
5,111,966	+		PS417_23635	0.81	-0.1
5,111,966	+		PS417_23635	0.81	-0.8
5,111,967	-		PS417_23635	0.81	-3.2
5,111,967	-		PS417_23635	0.81	-2.1
5,112,089	-				-0.0
5,112,104	+				+1.3
5,112,104	+				-1.2
5,112,105	-				-1.8
5,112,105	-				-0.9
5,112,153	+				+0.4
5,112,153	+				-0.0
5,112,155	+				-2.8
5,112,155	+				+1.6
5,112,156	-				-1.6
5,112,156	-				-2.1
5,112,156	-				-0.6
5,112,189	+				+0.3
5,112,293	+				+0.4
5,112,293	+				-2.7
5,112,294	-				-1.8
5,112,319	+				-2.2
5,112,320	-				+1.5
5,112,580	+		PS417_23640	0.39	-0.1
5,112,795	+		PS417_23640	0.63	-0.3
5,112,795	+		PS417_23640	0.63	+0.0
5,112,837	+				-1.0
5,112,838	-		PS417_23640	0.68	-0.4
5,112,886	+		PS417_23640	0.73	-1.4
5,112,886	+		PS417_23640	0.73	-0.4
5,112,887	-		PS417_23640	0.73	+0.8
5,112,887	-		PS417_23640	0.73	+1.8
5,112,887	-		PS417_23640	0.73	-1.1