Strain Fitness in Pseudomonas simiae WCS417 around PS417_22775

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,934,177	+				+0.2
4,934,178	-				-0.2
4,934,178	-				+1.0
4,934,192	+				+0.7
4,934,216	-				+1.0
4,934,229	+				+0.2
4,934,229	+				-0.9
4,934,229	+				+2.0
4,934,229	+				+0.4
4,934,230	-				+0.4
4,934,230	-				-0.2
4,934,230	-				+0.8
4,934,230	-				+0.0
4,934,233	+				+0.4
4,934,233	+				+3.2
4,934,233	+				+1.6
4,934,233	+				-0.8
4,934,234	-				+0.1
4,934,234	-				+1.4
4,934,234	-				-1.0
4,934,347	+		PS417_22770	0.20	+0.1
4,934,546	+		PS417_22770	0.49	+1.1
4,934,547	-		PS417_22770	0.49	+0.2
4,934,561	+		PS417_22770	0.51	+1.6
4,934,834	-				-0.2
4,934,858	-				-0.6
4,934,929	-				+0.4
4,935,020	+				-0.5
4,935,346	+		PS417_22775	0.20	-0.7
4,935,347	-		PS417_22775	0.21	-1.0
4,935,347	-		PS417_22775	0.21	-0.7
4,935,347	-		PS417_22775	0.21	+1.2
4,935,395	+		PS417_22775	0.24	-0.3
4,935,401	+		PS417_22775	0.25	-0.7
4,935,403	+		PS417_22775	0.25	-0.4
4,935,404	-		PS417_22775	0.25	+2.6
4,935,433	+		PS417_22775	0.27	-1.2
4,935,434	-		PS417_22775	0.27	-0.8
4,935,434	-		PS417_22775	0.27	+1.1
4,935,434	-		PS417_22775	0.27	+0.7
4,935,921	+		PS417_22775	0.65	-1.5
4,936,019	-		PS417_22775	0.73	-1.3
4,936,055	-		PS417_22775	0.76	-2.3
4,936,104	+		PS417_22775	0.80	+0.1
4,936,105	-		PS417_22775	0.80	+1.0
4,936,147	+		PS417_22775	0.83	-1.3
4,936,147	+				+0.6
4,936,635	-		PS417_22780	0.41	-2.6
4,936,742	+		PS417_22780	0.57	-2.2
4,936,905	-		PS417_22780	0.81	-1.2
4,936,962	+		PS417_22780	0.89	-1.0
4,936,962	+		PS417_22780	0.89	+0.1
4,936,963	-		PS417_22780	0.89	-1.7
4,936,964	+				-1.2
4,936,982	+				-0.2
4,936,983	-				-0.4
4,937,004	+				-0.4
4,937,086	-				+0.6
4,937,132	-				+0.3
4,937,150	-				+0.2
4,937,190	+				-0.2
4,937,190	+				+1.9
4,937,191	-				+0.4
4,937,300	+				-0.4
4,937,301	-				+1.0