Strain Fitness in Pseudomonas simiae WCS417 around PS417_21900

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,752,600	+		PS417_21895	0.62	-2.0
4,752,600	+		PS417_21895	0.62	-0.9
4,752,601	-		PS417_21895	0.62	+1.6
4,752,741	+		PS417_21895	0.71	+0.3
4,752,742	-		PS417_21895	0.71	+1.6
4,752,742	-		PS417_21895	0.71	-0.6
4,752,742	-		PS417_21895	0.71	-0.8
4,752,742	-		PS417_21895	0.71	-0.1
4,752,742	-		PS417_21895	0.71	+0.8
4,752,972	+		PS417_21895	0.85	-1.5
4,752,972	+		PS417_21895	0.85	-0.6
4,752,973	-		PS417_21895	0.85	-1.6
4,752,973	-		PS417_21895	0.85	-0.5
4,753,032	+		PS417_21895	0.89	-0.7
4,753,032	+		PS417_21895	0.89	+0.3
4,753,032	+		PS417_21895	0.89	-0.7
4,753,032	+				+1.6
4,753,033	-		PS417_21895	0.89	+0.1
4,753,033	-		PS417_21895	0.89	-0.2
4,753,033	-		PS417_21895	0.89	+1.0
4,753,122	-				+0.6
4,753,922	+		PS417_21900	0.60	-1.9
4,753,922	+		PS417_21900	0.60	+0.6
4,753,923	-		PS417_21900	0.60	-1.7
4,753,980	-		PS417_21900	0.66	-0.1
4,753,980	-		PS417_21900	0.66	-0.8
4,754,210	+		PS417_21900	0.89	-1.0
4,754,249	+				-0.9
4,754,249	+				-0.1
4,754,250	-				+0.0
4,754,250	-				+1.8
4,754,253	-				-1.9
4,754,593	+		PS417_21905	0.32	-1.0
4,754,659	+		PS417_21905	0.40	-0.5
4,754,812	+		PS417_21905	0.57	-0.3
4,754,891	-		PS417_21905	0.66	-0.2
4,754,891	-		PS417_21905	0.66	-0.9
4,755,036	+		PS417_21905	0.83	+1.3
4,755,036	+		PS417_21905	0.83	-0.4
4,755,036	+		PS417_21905	0.83	+0.1
4,755,037	-				-0.7
4,755,037	-				-1.4
4,755,037	-		PS417_21905	0.83	-0.3
4,755,037	-		PS417_21905	0.83	+0.4
4,755,212	+				-2.3
4,755,212	+				+0.5
4,755,212	+				+0.3
4,755,212	+				+1.1
4,755,213	-				+3.2
4,755,213	-				-0.4
4,755,247	-				-0.7
4,755,247	-				-0.7
4,755,247	-				+3.6