Strain Fitness in Pseudomonas simiae WCS417 around PS417_21215

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,612,001	+		PS417_21205	0.87	+0.0
4,612,002	-		PS417_21205	0.87	-1.9
4,612,002	-		PS417_21205	0.87	-1.0
4,612,002	-		PS417_21205	0.87	-1.5
4,612,044	-				-0.4
4,612,049	+				+1.0
4,612,049	+				+0.1
4,612,124	+				+1.1
4,612,125	-				+0.6
4,612,224	-		PS417_21210	0.14	-1.9
4,612,601	+		PS417_21210	0.66	+1.9
4,612,602	-		PS417_21210	0.66	-2.2
4,612,719	-		PS417_21210	0.82	+1.0
4,613,028	+				-0.7
4,613,029	-				-1.1
4,613,057	+				-0.2
4,613,216	+		PS417_21215	0.13	+1.1
4,613,216	+		PS417_21215	0.13	+0.8
4,613,217	-		PS417_21215	0.13	+0.4
4,613,217	-		PS417_21215	0.13	+0.7
4,613,263	+		PS417_21215	0.15	+1.2
4,613,263	+		PS417_21215	0.15	+0.6
4,613,263	+				-1.4
4,613,263	+		PS417_21215	0.15	+0.7
4,613,284	+				+0.0
4,613,285	-		PS417_21215	0.16	-0.7
4,613,290	+		PS417_21215	0.17	+1.8
4,613,291	-		PS417_21215	0.17	+1.1
4,613,291	-		PS417_21215	0.17	+1.0
4,613,291	-		PS417_21215	0.17	+0.4
4,613,291	-		PS417_21215	0.17	-1.0
4,613,291	-		PS417_21215	0.17	-0.5
4,613,291	-		PS417_21215	0.17	-0.7
4,613,291	-		PS417_21215	0.17	-0.5
4,614,139	+		PS417_21215	0.56	+0.4
4,614,140	-		PS417_21215	0.56	-0.1
4,614,351	-		PS417_21215	0.66	-0.0
4,614,526	-				+0.2
4,614,706	+		PS417_21215	0.83	+0.1
4,614,915	+				+2.0
4,615,067	+				-0.7
4,615,067	+				-2.6
4,615,067	+				-0.2
4,615,583	+		PS417_21220	0.40	+0.5
4,615,583	+		PS417_21220	0.40	-1.2
4,615,707	+		PS417_21220	0.51	+0.9
4,615,707	+		PS417_21220	0.51	+0.4
4,615,707	+		PS417_21220	0.51	+0.2
4,615,881	+		PS417_21220	0.65	-1.5
4,615,881	+				-1.0
4,615,882	-		PS417_21220	0.65	-1.1