Strain Fitness in Pseudomonas simiae WCS417 around PS417_20050

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,350,440	+				-0.9
4,350,441	-				-0.3
4,350,441	-				+0.5
4,350,449	+				+0.1
4,350,726	+		PS417_20045	0.29	-1.1
4,350,726	+		PS417_20045	0.29	-0.2
4,350,726	+		PS417_20045	0.29	-1.7
4,350,726	+		PS417_20045	0.29	-0.9
4,350,726	+		PS417_20045	0.29	-0.1
4,350,727	-		PS417_20045	0.29	-2.6
4,350,727	-		PS417_20045	0.29	-1.6
4,350,727	-		PS417_20045	0.29	+1.7
4,350,940	-		PS417_20045	0.51	-3.5
4,351,044	+		PS417_20045	0.62	+0.1
4,351,139	-		PS417_20045	0.71	-1.8
4,351,241	-		PS417_20045	0.81	-0.4
4,351,243	+		PS417_20045	0.82	-0.7
4,351,424	+				-0.7
4,351,425	-				-1.6
4,351,562	+		PS417_20050	0.16	-1.2
4,351,562	+		PS417_20050	0.16	-1.4
4,351,562	+		PS417_20050	0.16	-2.9
4,351,562	+		PS417_20050	0.16	-2.4
4,351,562	+		PS417_20050	0.16	-0.8
4,351,563	-		PS417_20050	0.16	-1.0
4,351,563	-		PS417_20050	0.16	+0.4
4,351,563	-		PS417_20050	0.16	-0.5
4,351,700	+		PS417_20050	0.31	+1.1
4,351,701	-		PS417_20050	0.31	+0.3
4,351,701	-		PS417_20050	0.31	-0.8
4,351,730	+		PS417_20050	0.34	+0.6
4,351,822	+		PS417_20050	0.45	-1.1
4,351,966	+		PS417_20050	0.60	-1.5
4,351,966	+		PS417_20050	0.60	-0.1
4,351,966	+		PS417_20050	0.60	-1.1
4,351,974	-		PS417_20050	0.61	-1.8
4,352,073	-		PS417_20050	0.72	-1.5
4,352,106	-		PS417_20050	0.76	-0.9
4,352,106	-		PS417_20050	0.76	-1.8
4,352,350	+				-0.5
4,352,413	+		PS417_20055	0.14	-0.2
4,352,737	-		PS417_20055	0.64	-0.4
4,352,737	-		PS417_20055	0.64	+0.1
4,352,737	-		PS417_20055	0.64	-0.1
4,353,000	-				-0.1
4,353,051	+				-1.3
4,353,052	-				-2.9
4,353,063	+				+0.3
4,353,063	+				+1.2
4,353,064	-				+0.9
4,353,064	-				+0.8
4,353,090	+				+0.1
4,353,174	+		PS417_20060	0.15	-0.1
4,353,174	+		PS417_20060	0.15	-0.6
4,353,174	+		PS417_20060	0.15	+1.4
4,353,175	-		PS417_20060	0.15	-1.4
4,353,175	-		PS417_20060	0.15	+1.4
4,353,175	-		PS417_20060	0.15	+0.1
4,353,175	-		PS417_20060	0.15	+0.4
4,353,175	-		PS417_20060	0.15	-0.6
4,353,175	-		PS417_20060	0.15	+0.9
4,353,175	-		PS417_20060	0.15	-1.5
4,353,175	-		PS417_20060	0.15	+0.9
4,353,175	-		PS417_20060	0.15	-0.6
4,353,179	-		PS417_20060	0.16	-2.1
4,353,322	-		PS417_20060	0.27	+1.2