Strain Fitness in Pseudomonas simiae WCS417 around PS417_18480

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,016,295	+				+1.1
4,016,317	+				+0.9
4,016,409	+				+0.5
4,016,409	+				-1.3
4,016,416	-				+1.3
4,016,416	-				-0.5
4,016,549	+		PS417_18470	0.65	-1.9
4,016,549	+		PS417_18470	0.65	-1.3
4,016,550	-		PS417_18470	0.66	-1.5
4,016,581	-		PS417_18470	0.80	+1.0
4,016,683	+				+1.4
4,016,683	+				-0.4
4,016,684	-				-0.7
4,016,728	+		PS417_18475	0.13	+0.2
4,016,729	-		PS417_18475	0.14	+0.6
4,016,729	-		PS417_18475	0.14	-0.2
4,016,729	-		PS417_18475	0.14	+0.0
4,017,272	+				-0.5
4,017,312	+				-1.5
4,017,312	+				+0.6
4,017,313	-				-1.3
4,017,317	+				-0.7
4,017,496	+		PS417_18480	0.22	-0.4
4,017,594	+		PS417_18480	0.32	+0.9
4,017,595	-		PS417_18480	0.32	+0.2
4,017,598	+		PS417_18480	0.32	-1.2
4,017,598	+		PS417_18480	0.32	-1.0
4,017,599	-		PS417_18480	0.32	+0.7
4,017,599	-		PS417_18480	0.32	+0.8
4,017,599	-		PS417_18480	0.32	+1.7
4,017,599	-				+0.1
4,017,599	-				+1.7
4,017,599	-		PS417_18480	0.32	+1.3
4,017,635	+		PS417_18480	0.36	+1.6
4,017,637	+		PS417_18480	0.36	+0.0
4,017,637	+		PS417_18480	0.36	+1.1
4,017,637	+		PS417_18480	0.36	+1.1
4,017,637	+		PS417_18480	0.36	+0.9
4,017,638	-		PS417_18480	0.36	-0.0
4,017,638	-				+1.7
4,017,638	-		PS417_18480	0.36	-1.0
4,017,638	-		PS417_18480	0.36	-0.1
4,017,638	-		PS417_18480	0.36	+0.0
4,017,690	+		PS417_18480	0.42	-0.1
4,017,956	+		PS417_18480	0.70	-0.4
4,017,956	+		PS417_18480	0.70	+0.2
4,017,956	+		PS417_18480	0.70	-0.9
4,017,957	-		PS417_18480	0.70	+1.4
4,017,957	-		PS417_18480	0.70	-2.8
4,017,957	-		PS417_18480	0.70	+0.3
4,018,194	+				+0.1
4,018,217	-				+1.3
4,018,222	+				-0.3
4,018,223	-				-0.7
4,018,235	+				-0.9
4,018,644	+		PS417_18485	0.57	+0.1
4,018,644	+		PS417_18485	0.57	-1.0
4,018,644	+		PS417_18485	0.57	+0.2
4,018,645	-		PS417_18485	0.57	+0.3
4,018,645	-		PS417_18485	0.57	+0.8
4,018,645	-		PS417_18485	0.57	+0.1
4,018,916	+				+1.0
4,018,968	+				-1.0
4,018,969	-				+0.3
4,019,051	+				-1.4