Strain Fitness in Pseudomonas simiae WCS417 around PS417_18235

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,972,788	-				-1.1
3,972,801	+		PS417_18230	0.42	-0.5
3,972,801	+		PS417_18230	0.42	+0.8
3,972,820	+		PS417_18230	0.43	-0.5
3,972,820	+		PS417_18230	0.43	+0.1
3,972,964	+		PS417_18230	0.52	-0.4
3,972,964	+		PS417_18230	0.52	-1.8
3,972,965	-		PS417_18230	0.52	+0.5
3,972,965	-		PS417_18230	0.52	-0.6
3,973,228	+		PS417_18230	0.70	+1.5
3,973,229	-		PS417_18230	0.70	-0.2
3,973,336	+		PS417_18230	0.77	-0.7
3,973,393	+		PS417_18230	0.81	-1.8
3,973,489	+		PS417_18230	0.87	-1.3
3,973,490	-		PS417_18230	0.87	+0.8
3,973,618	+				+1.3
3,973,733	-				-0.4
3,973,932	+		PS417_18235	0.29	+2.0
3,974,016	-		PS417_18235	0.43	+2.2
3,974,241	-		PS417_18235	0.81	-0.1
3,974,457	+				-0.9
3,974,477	+		PS417_18240	0.12	-1.3
3,974,477	+		PS417_18240	0.12	-2.2
3,974,507	-		PS417_18240	0.17	-0.5
3,974,615	-		PS417_18240	0.33	-3.4
3,974,623	+		PS417_18240	0.34	-0.1
3,974,623	+		PS417_18240	0.34	-0.4
3,974,624	-		PS417_18240	0.35	+0.2
3,974,624	-		PS417_18240	0.35	-0.2
3,974,800	+		PS417_18240	0.61	+0.4
3,974,801	-		PS417_18240	0.61	-1.4
3,974,801	-		PS417_18240	0.61	+0.0
3,974,830	+		PS417_18240	0.66	-0.3
3,974,831	-		PS417_18240	0.66	-2.1
3,974,831	-		PS417_18240	0.66	-1.8
3,974,935	+		PS417_18240	0.81	+1.9
3,974,935	+		PS417_18240	0.81	+0.7
3,974,936	-		PS417_18240	0.82	+0.3
3,974,954	+		PS417_18240	0.84	-0.0
3,975,016	+				-0.8
3,975,183	-		PS417_18245	0.10	-0.6