Strain Fitness in Pseudomonas simiae WCS417 around PS417_18115

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,945,782	-		PS417_18110	0.73	+1.2
3,945,793	+		PS417_18110	0.73	+0.2
3,945,943	+		PS417_18110	0.80	-1.0
3,946,118	+				+1.7
3,946,118	+		PS417_18110	0.87	-0.5
3,946,120	+		PS417_18110	0.87	-0.8
3,946,120	+		PS417_18110	0.87	-0.4
3,946,195	+				+0.3
3,946,196	-				-2.3
3,946,319	-				+0.4
3,946,319	-				+0.6
3,946,319	-				-1.0
3,946,349	-				+1.8
3,946,444	+				-1.6
3,946,444	+				-0.4
3,946,444	+				+0.2
3,946,445	-				+2.7
3,946,513	+				-1.7
3,946,563	+				-0.1
3,946,563	+				+0.7
3,946,563	+				+0.2
3,946,564	-				+0.7
3,947,053	+		PS417_18115	0.34	+0.3
3,947,191	+		PS417_18115	0.42	-0.4
3,947,192	-				+0.7
3,947,420	-		PS417_18115	0.56	-0.1
3,947,633	+		PS417_18115	0.70	-2.6
3,947,795	-		PS417_18115	0.80	-0.2
3,947,795	-		PS417_18115	0.80	-1.1
3,948,127	-				-0.1
3,948,173	+				-0.9
3,948,174	-				-0.7
3,948,890	+				-1.6
3,948,891	-				-0.1
3,949,087	-		PS417_18125	0.19	-0.8
3,949,104	+		PS417_18125	0.21	-0.5