Strain Fitness in Pseudomonas simiae WCS417 around PS417_18085

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,937,399	-		PS417_18080	0.39	-2.3
3,937,581	+		PS417_18080	0.54	+0.1
3,937,582	-		PS417_18080	0.54	-0.6
3,937,582	-		PS417_18080	0.54	+1.0
3,937,582	-		PS417_18080	0.54	+0.9
3,937,610	+		PS417_18080	0.56	-0.0
3,937,635	+		PS417_18080	0.58	+1.0
3,937,687	-		PS417_18080	0.63	-0.8
3,937,755	+		PS417_18080	0.68	+0.2
3,937,755	+		PS417_18080	0.68	+0.2
3,938,161	+				+0.1
3,938,161	+				+1.5
3,938,162	-				+0.1
3,938,162	-				-1.3
3,938,179	-				+0.0
3,938,181	+				-2.5
3,938,213	+				-0.6
3,938,339	+		PS417_18085	0.12	-0.6
3,938,501	+		PS417_18085	0.22	+5.2
3,938,501	+		PS417_18085	0.22	+0.5
3,938,502	-		PS417_18085	0.22	+2.1
3,938,810	+		PS417_18085	0.40	-1.6
3,938,810	+		PS417_18085	0.40	-2.8
3,938,811	-		PS417_18085	0.40	+1.8
3,939,378	-		PS417_18085	0.74	+0.3
3,939,447	-		PS417_18085	0.78	-0.8
3,939,447	-		PS417_18085	0.78	+0.1
3,939,529	+		PS417_18085	0.83	-0.8
3,939,529	+		PS417_18085	0.83	-0.0
3,939,536	+		PS417_18085	0.83	-2.1
3,939,605	-		PS417_18085	0.87	+0.2
3,939,823	-				-0.2
3,939,837	+				-0.0
3,939,837	+				-1.9
3,939,869	+				+1.0
3,939,886	-				-1.3
3,939,911	-				-1.3
3,939,911	-				-0.1
3,939,974	+				+0.5
3,939,975	-				-0.6
3,939,975	-				-0.6
3,940,003	+				+1.4
3,940,005	+				+0.3
3,940,005	+				-0.1
3,940,011	-				+1.2
3,940,096	+				-1.5
3,940,318	-		PS417_18090	0.23	+0.4
3,940,425	+		PS417_18090	0.36	-0.1
3,940,426	-		PS417_18090	0.36	-0.8
3,940,731	+		PS417_18090	0.75	+0.4
3,940,732	-		PS417_18090	0.75	-0.3
3,940,732	-		PS417_18090	0.75	-0.2