Strain Fitness in Pseudomonas simiae WCS417 around PS417_15190

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,328,512	+		PS417_15185	0.58	+0.1
3,328,512	+		PS417_15185	0.58	-0.8
3,328,527	+		PS417_15185	0.59	+1.4
3,328,528	-		PS417_15185	0.59	-0.6
3,328,531	+		PS417_15185	0.59	+1.1
3,328,532	-		PS417_15185	0.60	+0.4
3,328,532	-				+0.2
3,328,600	+		PS417_15185	0.65	+1.2
3,328,601	-		PS417_15185	0.65	-0.8
3,328,777	+		PS417_15185	0.78	-0.0
3,328,777	+		PS417_15185	0.78	+0.1
3,328,778	-				-0.5
3,328,778	-		PS417_15185	0.78	-1.1
3,328,778	-		PS417_15185	0.78	-0.3
3,328,778	-		PS417_15185	0.78	-0.0
3,328,778	-		PS417_15185	0.78	-1.8
3,328,778	-				-1.2
3,328,778	-		PS417_15185	0.78	-3.3
3,329,057	+				-1.2
3,329,057	+				+0.7
3,329,063	-				-1.6
3,329,075	+				-1.2
3,329,075	+				-0.8
3,329,075	+				-0.9
3,329,076	-				+0.3
3,329,076	-				+0.7
3,329,076	-				+0.2
3,329,076	-				-1.8
3,329,079	+				-0.5
3,329,079	+				+0.4
3,329,080	-				-0.1
3,329,210	-				+0.5
3,329,360	+				+1.8
3,329,370	-				-2.0
3,329,458	-				-1.8
3,329,458	-				-1.0
3,329,867	+		PS417_15190	0.25	+0.6
3,329,868	-		PS417_15190	0.25	-1.0
3,329,868	-		PS417_15190	0.25	+2.0
3,329,884	-		PS417_15190	0.26	+0.4
3,329,905	-		PS417_15190	0.27	-0.8
3,329,969	-		PS417_15190	0.29	-0.1
3,329,999	+		PS417_15190	0.31	+0.3
3,329,999	+		PS417_15190	0.31	-1.1
3,329,999	+		PS417_15190	0.31	-0.1
3,330,076	+		PS417_15190	0.34	+0.0
3,330,076	+		PS417_15190	0.34	-0.3
3,330,076	+		PS417_15190	0.34	-0.8
3,330,076	+		PS417_15190	0.34	+1.0
3,330,076	+		PS417_15190	0.34	+0.2
3,330,077	-		PS417_15190	0.34	-1.8
3,330,077	-		PS417_15190	0.34	-1.1
3,330,077	-		PS417_15190	0.34	+0.6
3,330,185	+		PS417_15190	0.38	-0.2
3,330,185	+		PS417_15190	0.38	-0.2
3,330,185	+		PS417_15190	0.38	-0.3
3,330,186	-		PS417_15190	0.38	-1.4
3,330,186	-		PS417_15190	0.38	-0.1
3,330,384	-		PS417_15190	0.46	+1.0
3,330,467	+		PS417_15190	0.49	-0.7
3,330,467	+		PS417_15190	0.49	+2.1
3,330,467	+		PS417_15190	0.49	-1.4
3,330,467	+		PS417_15190	0.49	+3.1
3,330,468	-		PS417_15190	0.49	+1.4
3,330,555	-		PS417_15190	0.53	-2.4
3,330,723	+		PS417_15190	0.59	+1.3
3,330,724	-				-1.9
3,331,067	+		PS417_15190	0.73	-0.1
3,331,067	+		PS417_15190	0.73	-0.3
3,331,068	-		PS417_15190	0.73	+0.5
3,331,070	+		PS417_15190	0.73	+0.0
3,331,071	-		PS417_15190	0.73	-0.8
3,331,094	+		PS417_15190	0.74	+0.3
3,331,269	-		PS417_15190	0.81	-1.6
3,331,509	+				+0.4
3,331,678	+				+0.4
3,331,679	-				+0.6
3,331,743	+				-0.5
3,331,755	+				+0.1
3,331,755	+				+0.1
3,331,755	+				-1.0
3,331,756	-				+0.5
3,331,756	-				-0.6
3,331,756	-				-0.2
3,331,756	-				+4.2
3,331,756	-				+3.0
3,331,782	+				-0.2
3,331,926	+				-0.8
3,331,927	-				+1.2
3,331,959	-				-0.5
3,331,959	-				-1.6
3,331,960	+				-0.1
3,331,960	+				-1.5
3,331,961	-				+0.9
3,331,961	-				-2.1
3,332,080	+				-0.2
3,332,080	+				-1.9
3,332,080	+				-0.1
3,332,081	-				+2.5
3,332,085	+				+0.7
3,332,086	-				-1.2
3,332,123	-				+0.6
3,332,266	+				-2.9
3,332,266	+				-1.4
3,332,284	+				-1.1
3,332,285	-				-1.6
3,332,298	-				-1.3
3,332,505	-				-0.4
3,332,572	+				-0.0
3,332,573	-				+0.7
3,332,608	+				+0.8
3,332,688	+				-0.2