Strain Fitness in Pseudomonas simiae WCS417 around PS417_14955

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,265,429	-				+0.5
3,265,554	+		PS417_14950	0.12	+2.7
3,265,840	-		PS417_14950	0.48	+1.7
3,265,957	-		PS417_14950	0.62	-0.1
3,266,102	+		PS417_14950	0.80	+1.3
3,266,251	-				+1.3
3,266,410	-				-0.3
3,266,457	-				+4.7
3,266,457	-				+0.7
3,266,554	+				-0.0
3,266,555	-				+0.7
3,266,557	-				+0.4
3,266,582	+				+0.3
3,266,669	-				-0.2
3,266,669	-				+0.5
3,266,755	-				+0.8
3,267,041	+		PS417_14955	0.15	+0.5
3,267,042	-		PS417_14955	0.15	+1.0
3,267,381	+		PS417_14955	0.24	+0.4
3,267,404	+		PS417_14955	0.24	-0.1
3,267,405	-		PS417_14955	0.24	-0.9
3,267,618	-		PS417_14955	0.30	+0.1
3,267,627	+		PS417_14955	0.30	-0.8
3,267,627	+		PS417_14955	0.30	-0.8
3,267,628	-				+0.2
3,267,628	-		PS417_14955	0.30	+0.8
3,267,628	-		PS417_14955	0.30	+0.7
3,267,634	+		PS417_14955	0.30	-0.0
3,267,698	-		PS417_14955	0.32	+0.4
3,267,701	+		PS417_14955	0.32	+0.7
3,267,701	+		PS417_14955	0.32	+1.4
3,268,110	-		PS417_14955	0.42	-0.1
3,268,110	-		PS417_14955	0.42	-1.7
3,268,155	+		PS417_14955	0.43	-1.7
3,268,155	+		PS417_14955	0.43	-0.2
3,268,156	-		PS417_14955	0.43	-0.7
3,268,156	-		PS417_14955	0.43	+0.1
3,268,156	-		PS417_14955	0.43	+1.0
3,268,156	-		PS417_14955	0.43	+0.7
3,268,156	-		PS417_14955	0.43	-0.0
3,268,156	-				+1.8
3,268,156	-		PS417_14955	0.43	-1.3
3,268,466	+		PS417_14955	0.51	-1.4
3,268,467	-		PS417_14955	0.51	-1.4
3,268,468	+		PS417_14955	0.51	+0.0
3,268,469	-		PS417_14955	0.51	+0.2
3,268,469	-		PS417_14955	0.51	+0.4
3,268,541	-		PS417_14955	0.52	+1.9
3,268,542	+		PS417_14955	0.52	+0.7
3,268,542	+		PS417_14955	0.52	+0.4
3,268,543	-		PS417_14955	0.52	+1.7
3,268,543	-		PS417_14955	0.52	+0.5
3,268,543	-		PS417_14955	0.52	-0.0
3,268,543	-		PS417_14955	0.52	+0.7
3,268,543	-		PS417_14955	0.52	-0.8
3,268,543	-		PS417_14955	0.52	+0.4
3,268,543	-		PS417_14955	0.52	+0.1
3,268,545	+		PS417_14955	0.53	+0.9
3,268,545	+		PS417_14955	0.53	+0.5
3,268,545	+		PS417_14955	0.53	-0.3
3,268,545	+		PS417_14955	0.53	-0.1
3,268,545	+		PS417_14955	0.53	-1.8
3,268,546	-		PS417_14955	0.53	-3.4
3,268,546	-		PS417_14955	0.53	+1.0
3,268,550	-		PS417_14955	0.53	-0.0
3,268,550	-		PS417_14955	0.53	+0.4
3,268,583	+		PS417_14955	0.53	+0.2
3,268,628	+		PS417_14955	0.55	-1.3
3,268,628	+		PS417_14955	0.55	-1.8
3,268,628	+		PS417_14955	0.55	-1.1
3,268,701	+		PS417_14955	0.56	-1.0
3,268,724	+		PS417_14955	0.57	-0.2
3,268,725	-		PS417_14955	0.57	-3.0
3,268,992	-		PS417_14955	0.64	+2.5
3,269,096	-		PS417_14955	0.66	+0.6
3,269,137	+		PS417_14955	0.67	-2.3
3,269,138	-		PS417_14955	0.67	+0.7
3,269,143	-		PS417_14955	0.67	-0.1
3,269,143	-		PS417_14955	0.67	-1.4
3,269,186	+		PS417_14955	0.68	-0.0
3,269,187	-		PS417_14955	0.68	-1.1
3,269,187	-		PS417_14955	0.68	+1.0
3,269,187	-		PS417_14955	0.68	-1.5
3,269,187	-		PS417_14955	0.68	-0.9
3,269,189	-		PS417_14955	0.68	+0.6
3,269,332	-		PS417_14955	0.72	+0.7
3,269,332	-		PS417_14955	0.72	+2.4
3,269,429	+		PS417_14955	0.74	+0.2
3,269,606	+		PS417_14955	0.79	+0.1
3,269,698	+		PS417_14955	0.81	-1.4
3,269,725	-		PS417_14955	0.82	+1.1
3,269,842	-		PS417_14955	0.84	-0.1
3,269,918	-		PS417_14955	0.86	+1.4
3,269,933	+		PS417_14955	0.87	-0.4
3,269,933	+		PS417_14955	0.87	-0.3
3,269,933	+		PS417_14955	0.87	-0.2
3,269,933	+		PS417_14955	0.87	-1.0
3,269,934	-		PS417_14955	0.87	+0.4
3,269,934	-		PS417_14955	0.87	+0.4
3,269,934	-		PS417_14955	0.87	+0.7
3,270,038	+		PS417_14955	0.89	+1.3
3,270,039	-		PS417_14955	0.89	-0.0
3,270,039	-		PS417_14955	0.89	+1.4
3,270,089	-				-1.9
3,270,105	+				-2.0
3,270,105	+				+0.8
3,270,321	+				-0.2
3,270,322	-				+0.6
3,270,336	+				-1.1
3,270,421	+				-0.6
3,270,423	+				-0.0
3,270,423	+				-0.6
3,270,423	+				-1.8
3,270,423	+				+0.9
3,270,423	+				+0.6
3,270,423	+				+0.9
3,270,423	+				-0.2
3,270,423	+				-0.5
3,270,424	-				+2.2
3,270,424	-				-0.2
3,270,424	-				+0.6
3,270,424	-				+0.7
3,270,424	-				+1.8
3,270,424	-				+0.4
3,270,447	-				+0.1
3,270,448	+				-0.5
3,270,489	-				-2.4
3,270,965	+		PS417_14960	0.38	-3.2
3,270,965	+		PS417_14960	0.38	-1.3
3,270,969	+		PS417_14960	0.39	-3.5
3,270,969	+		PS417_14960	0.39	-2.8
3,271,013	+		PS417_14960	0.42	-1.4
3,271,013	+		PS417_14960	0.42	-2.6
3,271,013	+		PS417_14960	0.42	-2.6
3,271,014	-		PS417_14960	0.42	-1.8
3,271,014	-		PS417_14960	0.42	-2.1
3,271,014	-		PS417_14960	0.42	-0.5
3,271,014	-		PS417_14960	0.42	-2.7
3,271,276	-		PS417_14960	0.63	-1.8
3,271,349	+		PS417_14960	0.68	+0.1
3,271,361	+		PS417_14960	0.69	-3.1
3,271,361	+		PS417_14960	0.69	-3.3
3,271,371	+		PS417_14960	0.70	-2.7