Strain Fitness in Pseudomonas simiae WCS417 around PS417_13555

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,986,647	+		PS417_13550	0.39	+0.2
2,986,648	-		PS417_13550	0.39	-0.1
2,986,648	-				-0.6
2,986,650	+		PS417_13550	0.39	+1.3
2,986,650	+		PS417_13550	0.39	-0.3
2,986,664	-		PS417_13550	0.41	-0.1
2,986,761	+		PS417_13550	0.52	+0.3
2,986,761	+		PS417_13550	0.52	-0.5
2,986,762	-		PS417_13550	0.52	-0.4
2,986,774	-		PS417_13550	0.53	+0.6
2,986,774	-		PS417_13550	0.53	-0.1
2,986,800	+		PS417_13550	0.56	-1.2
2,986,801	-		PS417_13550	0.57	-3.4
2,987,046	+		PS417_13550	0.85	+1.7
2,987,400	-		PS417_13555	0.32	-2.0
2,987,400	-		PS417_13555	0.32	-0.4
2,987,403	-		PS417_13555	0.32	-2.1
2,987,774	+		PS417_13555	0.85	-1.6
2,987,795	+		PS417_13555	0.88	-0.4
2,987,795	+		PS417_13555	0.88	-1.1
2,987,795	+		PS417_13555	0.88	+1.3
2,987,796	-		PS417_13555	0.88	+0.7
2,987,796	-		PS417_13555	0.88	-1.2
2,987,823	-				+4.4
2,987,823	-				+0.6
2,987,899	+				-2.7
2,987,904	+				+0.1
2,987,904	+				+0.4
2,987,905	-				+0.8
2,988,048	+		PS417_13560	0.23	+0.3
2,988,100	-		PS417_13560	0.31	+0.7
2,988,163	-		PS417_13560	0.40	+0.5
2,988,183	+		PS417_13560	0.42	+0.3
2,988,184	-		PS417_13560	0.43	-0.1
2,988,219	+		PS417_13560	0.48	-0.4
2,988,219	+		PS417_13560	0.48	+1.3
2,988,471	+		PS417_13560	0.84	-0.6
2,988,471	+		PS417_13560	0.84	+1.3
2,988,471	+		PS417_13560	0.84	-0.2
2,988,472	-		PS417_13560	0.84	-0.3
2,988,502	-		PS417_13560	0.88	-0.1
2,988,502	-		PS417_13560	0.88	-1.9
2,988,681	-		PS417_13565	0.10	+1.6
2,988,839	+		PS417_13565	0.26	+0.8
2,988,840	-		PS417_13565	0.26	+1.3
2,988,840	-		PS417_13565	0.26	+1.1