Strain Fitness in Pseudomonas simiae WCS417 around PS417_13360

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,935,777	+		PS417_13350	0.82	+0.4
2,935,778	-		PS417_13350	0.82	+0.3
2,935,796	+		PS417_13350	0.84	-0.6
2,935,796	+		PS417_13350	0.84	+0.5
2,935,797	-		PS417_13350	0.85	+1.6
2,935,996	+				-2.3
2,935,996	+				-0.2
2,935,996	+				+0.3
2,935,996	+				+0.3
2,935,996	+				-0.8
2,935,996	+				+0.1
2,935,996	+				-0.0
2,935,996	+				+1.5
2,935,997	-				-0.2
2,935,997	-				+0.1
2,935,997	-				-1.6
2,935,997	-				+0.1
2,935,998	+				+0.1
2,936,064	-		PS417_13355	0.20	-0.1
2,936,064	-		PS417_13355	0.20	+1.3
2,936,105	+		PS417_13355	0.31	-1.8
2,936,133	+		PS417_13355	0.38	-0.6
2,936,134	-				-0.6
2,936,297	+		PS417_13355	0.81	-0.5
2,936,297	+		PS417_13355	0.81	+0.8
2,936,297	+		PS417_13355	0.81	+1.0
2,936,298	-		PS417_13355	0.81	-0.6
2,936,306	-		PS417_13355	0.83	-0.3
2,936,334	+				+0.0
2,936,429	+				-1.7
2,936,429	+				+0.6
2,936,430	-				+0.8
2,936,430	-				-0.5
2,936,503	+				-0.7
2,936,503	+				-1.2
2,936,504	-				-1.3
2,936,611	+				-1.6
2,936,612	-				-2.0
2,936,720	+		PS417_13360	0.15	+3.5
2,936,721	-		PS417_13360	0.15	+0.4
2,936,722	+		PS417_13360	0.15	-1.3
2,936,722	+		PS417_13360	0.15	-0.8
2,936,722	+		PS417_13360	0.15	+0.3
2,936,723	-		PS417_13360	0.15	-0.5
2,936,723	-		PS417_13360	0.15	-0.7
2,936,723	-		PS417_13360	0.15	+0.1
2,936,723	-		PS417_13360	0.15	-0.6
2,936,723	-		PS417_13360	0.15	+0.6
2,936,723	-		PS417_13360	0.15	+0.5
2,936,723	-		PS417_13360	0.15	-0.5
2,936,726	+		PS417_13360	0.16	-1.7
2,936,726	+				-0.3
2,936,727	-		PS417_13360	0.16	+0.6
2,936,790	+		PS417_13360	0.29	-0.2
2,936,837	-		PS417_13360	0.39	-1.0
2,936,837	-		PS417_13360	0.39	-0.4
2,936,839	-		PS417_13360	0.39	-1.2
2,936,839	-		PS417_13360	0.39	+0.7
2,936,884	-		PS417_13360	0.49	-1.7
2,936,892	-		PS417_13360	0.50	-0.5
2,936,899	-		PS417_13360	0.52	-0.4
2,936,965	+		PS417_13360	0.65	-2.5
2,937,040	+		PS417_13360	0.81	-0.0
2,937,040	+		PS417_13360	0.81	+0.2
2,937,079	-		PS417_13360	0.89	-0.9
2,937,079	-		PS417_13360	0.89	-0.1
2,937,220	+				-1.1
2,937,288	+				-0.3
2,937,395	-				-0.3
2,937,395	-				+0.1
2,937,425	-				+0.2
2,937,591	-				+0.9
2,937,591	-				+0.4
2,937,620	-				+3.0
2,937,764	+		PS417_13365	0.24	+1.6
2,937,977	+		PS417_13365	0.46	-0.6
2,937,978	-		PS417_13365	0.46	-0.9
2,938,088	+		PS417_13365	0.58	-1.3
2,938,089	-		PS417_13365	0.58	-0.9
2,938,089	-		PS417_13365	0.58	+0.2
2,938,089	-		PS417_13365	0.58	+0.9
2,938,089	-		PS417_13365	0.58	-1.1
2,938,092	+		PS417_13365	0.58	+0.2
2,938,098	+		PS417_13365	0.59	-0.5
2,938,099	-		PS417_13365	0.59	+0.9
2,938,124	-		PS417_13365	0.62	+0.5
2,938,124	-		PS417_13365	0.62	+0.8