Strain Fitness in Pseudomonas simiae WCS417 around PS417_12490

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,714,944	-		PS417_12480	0.83	+0.1
2,715,086	-				-1.4
2,715,209	+				+3.3
2,715,267	-		PS417_12485	0.20	-2.2
2,715,270	+		PS417_12485	0.20	-0.3
2,715,271	-		PS417_12485	0.21	-0.6
2,715,318	+		PS417_12485	0.27	-2.6
2,715,561	+		PS417_12485	0.60	-1.0
2,715,561	+		PS417_12485	0.60	-0.6
2,715,652	+				-0.1
2,715,725	+		PS417_12485	0.82	-0.3
2,715,726	-				-0.3
2,715,875	+				-0.2
2,715,887	+				+0.3
2,715,887	+				+0.8
2,715,915	-				-1.3
2,715,926	-				-0.5
2,716,384	+		PS417_12490	0.83	-0.1
2,716,384	+		PS417_12490	0.83	+1.0
2,716,384	+				+0.1
2,716,476	+				+0.2
2,716,476	+				-3.7
2,716,477	-				-1.8
2,716,794	+		PS417_12495	0.71	-1.4
2,716,794	+		PS417_12495	0.71	-0.6
2,716,794	+		PS417_12495	0.71	+0.2
2,716,795	-		PS417_12495	0.71	+0.5
2,716,795	-		PS417_12495	0.71	+0.1
2,716,808	+		PS417_12495	0.74	-0.5
2,716,809	-		PS417_12495	0.74	+0.1
2,716,809	-		PS417_12495	0.74	+0.2
2,716,892	+				+0.7
2,716,892	+				+0.1
2,716,893	-				+0.9
2,716,967	+				+0.3
2,716,968	-				+1.3
2,717,322	-				+1.3
2,717,378	+		PS417_12500	0.12	+1.5
2,717,379	-		PS417_12500	0.13	+0.5